Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.18■□□□□ 0.02
Col10a1Q05306 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col10a1Q05306 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.18■□□□□ 0.02
Col10a1Q05306 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col10a1Q05306 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col10a1Q05306 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col10a1Q05306 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col10a1Q05306 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Col10a1Q05306 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col10a1Q05306 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
Col10a1Q05306 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col10a1Q05306 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col10a1Q05306 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col10a1Q05306 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col10a1Q05306 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.17■□□□□ 0.02
Col10a1Q05306 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.17■□□□□ 0.02
Col10a1Q05306 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.17■□□□□ 0.02
Col10a1Q05306 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col10a1Q05306 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col10a1Q05306 Mir770-201ENSMUST00000103252 94 ntBASIC15.17■□□□□ 0.02
Col10a1Q05306 Gm13216-201ENSMUST00000117145 591 ntBASIC15.17■□□□□ 0.02
Col10a1Q05306 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.17■□□□□ 0.02
Col10a1Q05306 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Col10a1Q05306 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.17■□□□□ 0.02
Col10a1Q05306 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Col10a1Q05306 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col10a1Q05306 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.17■□□□□ 0.02
Col10a1Q05306 Gm29707-201ENSMUST00000196325 491 ntBASIC15.17■□□□□ 0.02
Col10a1Q05306 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col10a1Q05306 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col10a1Q05306 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Col10a1Q05306 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col10a1Q05306 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.17■□□□□ 0.02
Col10a1Q05306 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col10a1Q05306 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col10a1Q05306 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col10a1Q05306 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col10a1Q05306 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col10a1Q05306 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col10a1Q05306 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col10a1Q05306 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col10a1Q05306 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.16■□□□□ 0.02
Col10a1Q05306 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col10a1Q05306 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col10a1Q05306 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Col10a1Q05306 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col10a1Q05306 Gm25016-201ENSMUST00000158399 131 ntBASIC15.16■□□□□ 0.02
Col10a1Q05306 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.16■□□□□ 0.02
Col10a1Q05306 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col10a1Q05306 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.16■□□□□ 0.02
Col10a1Q05306 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col10a1Q05306 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col10a1Q05306 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col10a1Q05306 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col10a1Q05306 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col10a1Q05306 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col10a1Q05306 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col10a1Q05306 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col10a1Q05306 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col10a1Q05306 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col10a1Q05306 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Col10a1Q05306 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col10a1Q05306 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.15■□□□□ 0.02
Col10a1Q05306 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Col10a1Q05306 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.15■□□□□ 0.02
Col10a1Q05306 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.15■□□□□ 0.02
Col10a1Q05306 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.15■□□□□ 0.02
Col10a1Q05306 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col10a1Q05306 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col10a1Q05306 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col10a1Q05306 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Col10a1Q05306 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col10a1Q05306 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col10a1Q05306 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col10a1Q05306 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col10a1Q05306 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col10a1Q05306 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col10a1Q05306 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Col10a1Q05306 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col10a1Q05306 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col10a1Q05306 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col10a1Q05306 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col10a1Q05306 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Col10a1Q05306 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col10a1Q05306 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Col10a1Q05306 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col10a1Q05306 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col10a1Q05306 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col10a1Q05306 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col10a1Q05306 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Col10a1Q05306 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col10a1Q05306 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col10a1Q05306 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col10a1Q05306 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col10a1Q05306 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col10a1Q05306 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col10a1Q05306 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col10a1Q05306 Gm6623-201ENSMUST00000173570 544 ntBASIC15.14■□□□□ 0.01
Col10a1Q05306 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col10a1Q05306 Gm6345-202ENSMUST00000180900 204 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms