Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cacna1sQ02789 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cacna1sQ02789 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cacna1sQ02789 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cacna1sQ02789 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cacna1sQ02789 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1sQ02789 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC20.75■□□□□ 0.91
Cacna1sQ02789 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1sQ02789 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC20.75■□□□□ 0.91
Cacna1sQ02789 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1sQ02789 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1sQ02789 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.75■□□□□ 0.91
Cacna1sQ02789 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Cacna1sQ02789 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1sQ02789 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1sQ02789 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.75■□□□□ 0.91
Cacna1sQ02789 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Cacna1sQ02789 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC20.75■□□□□ 0.91
Cacna1sQ02789 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1sQ02789 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1sQ02789 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1sQ02789 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1sQ02789 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC20.75■□□□□ 0.91
Cacna1sQ02789 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1sQ02789 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Cacna1sQ02789 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1sQ02789 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1sQ02789 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1sQ02789 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1sQ02789 Gm5366-201ENSMUST00000215494 1338 ntBASIC20.74■□□□□ 0.91
Cacna1sQ02789 AC154767.3-201ENSMUST00000225150 1342 ntBASIC20.74■□□□□ 0.91
Cacna1sQ02789 Gm4609-201ENSMUST00000106443 1002 ntBASIC20.74■□□□□ 0.91
Cacna1sQ02789 Gm5138-201ENSMUST00000113842 1002 ntBASIC20.74■□□□□ 0.91
Cacna1sQ02789 Gm15191-201ENSMUST00000117933 1000 ntBASIC20.74■□□□□ 0.91
Cacna1sQ02789 Gm12182-201ENSMUST00000118655 1008 ntBASIC20.74■□□□□ 0.91
Cacna1sQ02789 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC20.74■□□□□ 0.91
Cacna1sQ02789 Gm13882-201ENSMUST00000120886 1002 ntBASIC20.74■□□□□ 0.91
Cacna1sQ02789 Gm10284-201ENSMUST00000145057 1005 ntBASIC20.74■□□□□ 0.91
Cacna1sQ02789 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Cacna1sQ02789 Gm10481-201ENSMUST00000179228 1002 ntBASIC20.74■□□□□ 0.91
Cacna1sQ02789 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC20.74■□□□□ 0.91
Cacna1sQ02789 Gm2574-201ENSMUST00000181051 1002 ntBASIC20.74■□□□□ 0.91
Cacna1sQ02789 Gm3200-201ENSMUST00000181493 1002 ntBASIC20.74■□□□□ 0.91
Cacna1sQ02789 Gm4518-201ENSMUST00000182638 718 ntBASIC20.74■□□□□ 0.91
Cacna1sQ02789 Gm8330-201ENSMUST00000182754 1008 ntBASIC20.74■□□□□ 0.91
Cacna1sQ02789 Gm4575-201ENSMUST00000182991 1002 ntBASIC20.74■□□□□ 0.91
Cacna1sQ02789 Gm8709-201ENSMUST00000183230 1012 ntBASIC20.74■□□□□ 0.91
Cacna1sQ02789 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC20.74■□□□□ 0.91
Cacna1sQ02789 AC126408.1-201ENSMUST00000225184 523 ntBASIC20.74■□□□□ 0.91
Cacna1sQ02789 Gm10293-201ENSMUST00000076317 1002 ntBASIC20.74■□□□□ 0.91
Cacna1sQ02789 Gm6316-201ENSMUST00000082064 1020 ntBASIC20.74■□□□□ 0.91
Cacna1sQ02789 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1sQ02789 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Cacna1sQ02789 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1sQ02789 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1sQ02789 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Cacna1sQ02789 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacna1sQ02789 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Cacna1sQ02789 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC20.73■□□□□ 0.91
Cacna1sQ02789 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC20.73■□□□□ 0.91
Cacna1sQ02789 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC20.73■□□□□ 0.91
Cacna1sQ02789 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacna1sQ02789 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC20.73■□□□□ 0.91
Cacna1sQ02789 Fgf17-202ENSMUST00000227123 1336 ntBASIC20.73■□□□□ 0.91
Cacna1sQ02789 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacna1sQ02789 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacna1sQ02789 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Cacna1sQ02789 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacna1sQ02789 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cacna1sQ02789 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Cacna1sQ02789 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cacna1sQ02789 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC20.73■□□□□ 0.91
Cacna1sQ02789 Hist1h2al-201ENSMUST00000091708 339 ntBASIC20.73■□□□□ 0.91
Cacna1sQ02789 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cacna1sQ02789 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1sQ02789 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1sQ02789 Rprl2-201ENSMUST00000157150 290 ntBASIC20.72■□□□□ 0.91
Cacna1sQ02789 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1sQ02789 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Cacna1sQ02789 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Cacna1sQ02789 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Cacna1sQ02789 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1sQ02789 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1sQ02789 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1sQ02789 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1sQ02789 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC20.71■□□□□ 0.91
Cacna1sQ02789 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC20.71■□□□□ 0.91
Cacna1sQ02789 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1sQ02789 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1sQ02789 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Cacna1sQ02789 AC119177.1-201ENSMUST00000227647 1332 ntBASIC20.71■□□□□ 0.91
Cacna1sQ02789 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1sQ02789 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1sQ02789 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1sQ02789 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.71■□□□□ 0.91
Cacna1sQ02789 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1sQ02789 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1sQ02789 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1sQ02789 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC20.71■□□□□ 0.91
Cacna1sQ02789 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms