Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ufd1P70362 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ufd1P70362 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ufd1P70362 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ufd1P70362 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.18□□□□□ -0.14
Ufd1P70362 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ufd1P70362 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ufd1P70362 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ufd1P70362 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ufd1P70362 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ufd1P70362 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ufd1P70362 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ufd1P70362 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ufd1P70362 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ufd1P70362 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ufd1P70362 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ufd1P70362 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ufd1P70362 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ufd1P70362 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ufd1P70362 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ufd1P70362 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ufd1P70362 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ufd1P70362 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ufd1P70362 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ufd1P70362 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ufd1P70362 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ufd1P70362 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ufd1P70362 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ufd1P70362 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ufd1P70362 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ufd1P70362 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ufd1P70362 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ufd1P70362 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ufd1P70362 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.17□□□□□ -0.14
Ufd1P70362 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ufd1P70362 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ufd1P70362 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ufd1P70362 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ufd1P70362 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ufd1P70362 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ufd1P70362 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ufd1P70362 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ufd1P70362 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ufd1P70362 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ufd1P70362 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ufd1P70362 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ufd1P70362 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ufd1P70362 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ufd1P70362 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ufd1P70362 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ufd1P70362 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ufd1P70362 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ufd1P70362 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.16□□□□□ -0.14
Ufd1P70362 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ufd1P70362 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ufd1P70362 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Ufd1P70362 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.16□□□□□ -0.14
Ufd1P70362 Gm7514-201ENSMUST00000209475 934 ntBASIC14.16□□□□□ -0.14
Ufd1P70362 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC14.16□□□□□ -0.14
Ufd1P70362 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ufd1P70362 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ufd1P70362 Flg-201ENSMUST00000050758 1488 ntBASIC14.16□□□□□ -0.14
Ufd1P70362 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ufd1P70362 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ufd1P70362 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ufd1P70362 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ufd1P70362 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ufd1P70362 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ufd1P70362 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.15□□□□□ -0.14
Ufd1P70362 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ufd1P70362 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.15□□□□□ -0.14
Ufd1P70362 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ufd1P70362 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ufd1P70362 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ufd1P70362 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ufd1P70362 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ufd1P70362 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ufd1P70362 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Ufd1P70362 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ufd1P70362 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ufd1P70362 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ufd1P70362 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ufd1P70362 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Ufd1P70362 Gm11643-201ENSMUST00000119578 864 ntBASIC14.15□□□□□ -0.14
Ufd1P70362 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ufd1P70362 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ufd1P70362 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ufd1P70362 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ufd1P70362 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ufd1P70362 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Ufd1P70362 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ufd1P70362 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ufd1P70362 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.15□□□□□ -0.14
Ufd1P70362 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ufd1P70362 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ufd1P70362 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ufd1P70362 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ufd1P70362 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ufd1P70362 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ufd1P70362 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms