Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hmgb1P63158 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmgb1P63158 Phf7-203ENSMUST00000226565 1971 ntBASIC18.09■□□□□ 0.49
Hmgb1P63158 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmgb1P63158 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Hmgb1P63158 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmgb1P63158 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hmgb1P63158 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Hmgb1P63158 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Hmgb1P63158 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hmgb1P63158 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hmgb1P63158 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Hmgb1P63158 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hmgb1P63158 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Hmgb1P63158 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Hmgb1P63158 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.08■□□□□ 0.48
Hmgb1P63158 Gm5417-201ENSMUST00000079706 384 ntBASIC18.08■□□□□ 0.48
Hmgb1P63158 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Hmgb1P63158 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hmgb1P63158 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
Hmgb1P63158 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hmgb1P63158 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.08■□□□□ 0.48
Hmgb1P63158 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.08■□□□□ 0.48
Hmgb1P63158 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hmgb1P63158 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.08■□□□□ 0.48
Hmgb1P63158 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmgb1P63158 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmgb1P63158 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmgb1P63158 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
Hmgb1P63158 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Hmgb1P63158 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmgb1P63158 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Hmgb1P63158 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmgb1P63158 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hmgb1P63158 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmgb1P63158 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmgb1P63158 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hmgb1P63158 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmgb1P63158 Gm27011-201ENSMUST00000182352 972 ntBASIC18.07■□□□□ 0.48
Hmgb1P63158 Gm2274-201ENSMUST00000184539 609 ntBASIC18.07■□□□□ 0.48
Hmgb1P63158 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmgb1P63158 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmgb1P63158 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmgb1P63158 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmgb1P63158 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmgb1P63158 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hmgb1P63158 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmgb1P63158 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmgb1P63158 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmgb1P63158 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmgb1P63158 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
Hmgb1P63158 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hmgb1P63158 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmgb1P63158 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmgb1P63158 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmgb1P63158 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hmgb1P63158 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.06■□□□□ 0.48
Hmgb1P63158 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Hmgb1P63158 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmgb1P63158 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmgb1P63158 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.06■□□□□ 0.48
Hmgb1P63158 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmgb1P63158 Gm16061-201ENSMUST00000122167 857 ntBASIC18.06■□□□□ 0.48
Hmgb1P63158 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hmgb1P63158 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hmgb1P63158 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
Hmgb1P63158 Gm7370-201ENSMUST00000219471 767 ntBASIC18.06■□□□□ 0.48
Hmgb1P63158 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmgb1P63158 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hmgb1P63158 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmgb1P63158 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmgb1P63158 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmgb1P63158 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmgb1P63158 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmgb1P63158 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmgb1P63158 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hmgb1P63158 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgb1P63158 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgb1P63158 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgb1P63158 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgb1P63158 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.05■□□□□ 0.48
Hmgb1P63158 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgb1P63158 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Hmgb1P63158 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgb1P63158 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.05■□□□□ 0.48
Hmgb1P63158 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Hmgb1P63158 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Hmgb1P63158 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.05■□□□□ 0.48
Hmgb1P63158 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Hmgb1P63158 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgb1P63158 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Hmgb1P63158 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgb1P63158 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.05■□□□□ 0.48
Hmgb1P63158 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Hmgb1P63158 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Hmgb1P63158 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgb1P63158 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgb1P63158 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgb1P63158 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgb1P63158 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms