Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NcanP55066 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.32■□□□□ 0.36
NcanP55066 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.32■□□□□ 0.36
NcanP55066 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.32■□□□□ 0.36
NcanP55066 Mir6977-201ENSMUST00000184960 64 ntBASIC17.32■□□□□ 0.36
NcanP55066 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NcanP55066 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.32■□□□□ 0.36
NcanP55066 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
NcanP55066 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NcanP55066 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NcanP55066 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
NcanP55066 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
NcanP55066 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NcanP55066 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NcanP55066 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NcanP55066 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NcanP55066 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NcanP55066 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
NcanP55066 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NcanP55066 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NcanP55066 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NcanP55066 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NcanP55066 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
NcanP55066 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NcanP55066 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NcanP55066 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NcanP55066 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NcanP55066 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NcanP55066 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NcanP55066 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NcanP55066 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NcanP55066 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NcanP55066 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NcanP55066 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NcanP55066 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NcanP55066 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NcanP55066 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NcanP55066 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NcanP55066 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NcanP55066 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NcanP55066 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NcanP55066 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NcanP55066 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NcanP55066 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.3■□□□□ 0.36
NcanP55066 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.3■□□□□ 0.36
NcanP55066 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.3■□□□□ 0.36
NcanP55066 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.3■□□□□ 0.36
NcanP55066 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NcanP55066 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.3■□□□□ 0.36
NcanP55066 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
NcanP55066 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.3■□□□□ 0.36
NcanP55066 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.3■□□□□ 0.36
NcanP55066 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NcanP55066 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NcanP55066 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NcanP55066 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
NcanP55066 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NcanP55066 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NcanP55066 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NcanP55066 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.3■□□□□ 0.36
NcanP55066 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NcanP55066 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NcanP55066 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NcanP55066 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NcanP55066 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NcanP55066 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NcanP55066 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NcanP55066 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NcanP55066 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC17.29■□□□□ 0.36
NcanP55066 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NcanP55066 Gm38319-201ENSMUST00000194537 1266 ntBASIC17.29■□□□□ 0.36
NcanP55066 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.29■□□□□ 0.36
NcanP55066 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.29■□□□□ 0.36
NcanP55066 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NcanP55066 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NcanP55066 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.29■□□□□ 0.36
NcanP55066 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
NcanP55066 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NcanP55066 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NcanP55066 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NcanP55066 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NcanP55066 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NcanP55066 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NcanP55066 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NcanP55066 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NcanP55066 Gm12428-201ENSMUST00000119844 727 ntBASIC17.28■□□□□ 0.36
NcanP55066 Gm18622-201ENSMUST00000219361 595 ntBASIC17.28■□□□□ 0.36
NcanP55066 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.28■□□□□ 0.36
NcanP55066 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.28■□□□□ 0.36
NcanP55066 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NcanP55066 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NcanP55066 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NcanP55066 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.28■□□□□ 0.36
NcanP55066 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NcanP55066 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NcanP55066 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NcanP55066 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.28■□□□□ 0.36
NcanP55066 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NcanP55066 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
NcanP55066 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms