Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NrlP54846 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NrlP54846 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NrlP54846 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NrlP54846 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NrlP54846 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NrlP54846 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.5■□□□□ 0.39
NrlP54846 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.5■□□□□ 0.39
NrlP54846 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NrlP54846 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NrlP54846 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
NrlP54846 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NrlP54846 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NrlP54846 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NrlP54846 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NrlP54846 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NrlP54846 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NrlP54846 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NrlP54846 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NrlP54846 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NrlP54846 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.49■□□□□ 0.39
NrlP54846 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.49■□□□□ 0.39
NrlP54846 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
NrlP54846 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NrlP54846 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NrlP54846 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.48■□□□□ 0.39
NrlP54846 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NrlP54846 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NrlP54846 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NrlP54846 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NrlP54846 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NrlP54846 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
NrlP54846 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.48■□□□□ 0.39
NrlP54846 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NrlP54846 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NrlP54846 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.48■□□□□ 0.39
NrlP54846 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.48■□□□□ 0.39
NrlP54846 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NrlP54846 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NrlP54846 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NrlP54846 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NrlP54846 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NrlP54846 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NrlP54846 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NrlP54846 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NrlP54846 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NrlP54846 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.47■□□□□ 0.39
NrlP54846 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.47■□□□□ 0.39
NrlP54846 Gm2651-201ENSMUST00000203560 838 ntBASIC17.47■□□□□ 0.39
NrlP54846 Gm18206-201ENSMUST00000207027 926 ntBASIC17.47■□□□□ 0.39
NrlP54846 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.47■□□□□ 0.39
NrlP54846 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.47■□□□□ 0.39
NrlP54846 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NrlP54846 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NrlP54846 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NrlP54846 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NrlP54846 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NrlP54846 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.47■□□□□ 0.39
NrlP54846 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.47■□□□□ 0.39
NrlP54846 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.47■□□□□ 0.39
NrlP54846 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NrlP54846 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NrlP54846 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NrlP54846 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NrlP54846 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NrlP54846 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NrlP54846 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NrlP54846 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NrlP54846 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NrlP54846 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NrlP54846 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.46■□□□□ 0.39
NrlP54846 Gm44454-201ENSMUST00000198541 138 ntBASIC17.46■□□□□ 0.39
NrlP54846 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NrlP54846 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
NrlP54846 Gm6376-201ENSMUST00000209407 580 ntBASIC17.46■□□□□ 0.39
NrlP54846 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.46■□□□□ 0.39
NrlP54846 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NrlP54846 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
NrlP54846 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NrlP54846 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NrlP54846 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
NrlP54846 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NrlP54846 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NrlP54846 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NrlP54846 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NrlP54846 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NrlP54846 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NrlP54846 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NrlP54846 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NrlP54846 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.45■□□□□ 0.38
NrlP54846 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NrlP54846 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NrlP54846 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NrlP54846 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.45■□□□□ 0.38
NrlP54846 Gm15165-201ENSMUST00000118140 502 ntBASIC17.45■□□□□ 0.38
NrlP54846 Gm6296-201ENSMUST00000222599 943 ntBASIC17.45■□□□□ 0.38
NrlP54846 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NrlP54846 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NrlP54846 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NrlP54846 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms