Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.27□□□□□ -0.13
TgfaP48030 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TgfaP48030 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TgfaP48030 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TgfaP48030 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TgfaP48030 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TgfaP48030 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TgfaP48030 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TgfaP48030 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TgfaP48030 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TgfaP48030 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TgfaP48030 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TgfaP48030 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TgfaP48030 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TgfaP48030 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TgfaP48030 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TgfaP48030 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TgfaP48030 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TgfaP48030 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TgfaP48030 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
TgfaP48030 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TgfaP48030 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TgfaP48030 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TgfaP48030 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TgfaP48030 Gm14140-201ENSMUST00000119999 995 ntBASIC14.26□□□□□ -0.13
TgfaP48030 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TgfaP48030 Gm6550-201ENSMUST00000187574 993 ntBASIC14.26□□□□□ -0.13
TgfaP48030 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.26□□□□□ -0.13
TgfaP48030 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.26□□□□□ -0.13
TgfaP48030 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.26□□□□□ -0.13
TgfaP48030 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TgfaP48030 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.26□□□□□ -0.13
TgfaP48030 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
TgfaP48030 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TgfaP48030 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TgfaP48030 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TgfaP48030 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TgfaP48030 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.26□□□□□ -0.13
TgfaP48030 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TgfaP48030 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TgfaP48030 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.26□□□□□ -0.13
TgfaP48030 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TgfaP48030 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TgfaP48030 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TgfaP48030 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TgfaP48030 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.25□□□□□ -0.13
TgfaP48030 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TgfaP48030 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TgfaP48030 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TgfaP48030 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TgfaP48030 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TgfaP48030 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TgfaP48030 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TgfaP48030 Gm23935-201ENSMUST00000102303 57 ntBASIC14.25□□□□□ -0.13
TgfaP48030 Gm24270-201ENSMUST00000102326 57 ntBASIC14.25□□□□□ -0.13
TgfaP48030 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.25□□□□□ -0.13
TgfaP48030 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
TgfaP48030 Gm24245-201ENSMUST00000157318 57 ntBASIC14.25□□□□□ -0.13
TgfaP48030 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TgfaP48030 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.25□□□□□ -0.13
TgfaP48030 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.25□□□□□ -0.13
TgfaP48030 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TgfaP48030 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TgfaP48030 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TgfaP48030 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TgfaP48030 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TgfaP48030 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.25□□□□□ -0.13
TgfaP48030 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TgfaP48030 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TgfaP48030 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TgfaP48030 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.25□□□□□ -0.13
TgfaP48030 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TgfaP48030 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.25□□□□□ -0.13
TgfaP48030 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TgfaP48030 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TgfaP48030 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TgfaP48030 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TgfaP48030 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TgfaP48030 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TgfaP48030 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TgfaP48030 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TgfaP48030 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TgfaP48030 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TgfaP48030 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TgfaP48030 Gm14822-201ENSMUST00000122247 291 ntBASIC14.24□□□□□ -0.13
TgfaP48030 Gm12497-201ENSMUST00000138778 237 ntBASIC14.24□□□□□ -0.13
TgfaP48030 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TgfaP48030 Gm9727-201ENSMUST00000161387 555 ntBASIC14.24□□□□□ -0.13
TgfaP48030 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.24□□□□□ -0.13
TgfaP48030 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TgfaP48030 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TgfaP48030 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TgfaP48030 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TgfaP48030 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TgfaP48030 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TgfaP48030 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TgfaP48030 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TgfaP48030 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TgfaP48030 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TgfaP48030 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms