Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xcl1P47993 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xcl1P47993 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Xcl1P47993 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xcl1P47993 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Xcl1P47993 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xcl1P47993 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Xcl1P47993 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Xcl1P47993 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Xcl1P47993 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Xcl1P47993 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Xcl1P47993 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Xcl1P47993 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Xcl1P47993 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Xcl1P47993 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Xcl1P47993 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Xcl1P47993 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.69
Xcl1P47993 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Xcl1P47993 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xcl1P47993 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xcl1P47993 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Xcl1P47993 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xcl1P47993 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xcl1P47993 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xcl1P47993 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xcl1P47993 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Xcl1P47993 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xcl1P47993 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xcl1P47993 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xcl1P47993 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xcl1P47993 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xcl1P47993 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC10.77□□□□□ -0.69
Xcl1P47993 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xcl1P47993 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Xcl1P47993 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Xcl1P47993 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xcl1P47993 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Xcl1P47993 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xcl1P47993 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xcl1P47993 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xcl1P47993 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xcl1P47993 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xcl1P47993 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Xcl1P47993 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xcl1P47993 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xcl1P47993 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xcl1P47993 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xcl1P47993 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.69
Xcl1P47993 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC10.77□□□□□ -0.69
Xcl1P47993 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xcl1P47993 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Xcl1P47993 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Xcl1P47993 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Xcl1P47993 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Xcl1P47993 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Xcl1P47993 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC10.76□□□□□ -0.69
Xcl1P47993 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Xcl1P47993 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Xcl1P47993 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Xcl1P47993 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC10.76□□□□□ -0.69
Xcl1P47993 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Xcl1P47993 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Xcl1P47993 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Xcl1P47993 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC10.76□□□□□ -0.69
Xcl1P47993 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Xcl1P47993 Gm8770-201ENSMUST00000121113 1109 ntBASIC10.76□□□□□ -0.69
Xcl1P47993 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Xcl1P47993 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Xcl1P47993 Krt8-ps-201ENSMUST00000208495 945 ntBASIC10.76□□□□□ -0.69
Xcl1P47993 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Xcl1P47993 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Xcl1P47993 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Xcl1P47993 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Xcl1P47993 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Xcl1P47993 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Xcl1P47993 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Xcl1P47993 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Xcl1P47993 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Xcl1P47993 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Xcl1P47993 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Xcl1P47993 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Xcl1P47993 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Xcl1P47993 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Xcl1P47993 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Xcl1P47993 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Xcl1P47993 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Xcl1P47993 Ccdc166-201ENSMUST00000182172 2584 ntBASIC10.75□□□□□ -0.69
Xcl1P47993 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Xcl1P47993 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Xcl1P47993 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Xcl1P47993 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Xcl1P47993 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Xcl1P47993 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Xcl1P47993 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Xcl1P47993 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Xcl1P47993 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Xcl1P47993 Gm37736-201ENSMUST00000193564 2802 ntBASIC10.75□□□□□ -0.69
Xcl1P47993 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Xcl1P47993 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Xcl1P47993 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms