Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Gdf6P43028 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gdf6P43028 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gdf6P43028 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Gdf6P43028 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Gdf6P43028 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gdf6P43028 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gdf6P43028 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gdf6P43028 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gdf6P43028 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gdf6P43028 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.26■□□□□ 0.35
Gdf6P43028 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.26■□□□□ 0.35
Gdf6P43028 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Gdf6P43028 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gdf6P43028 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.26■□□□□ 0.35
Gdf6P43028 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gdf6P43028 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gdf6P43028 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gdf6P43028 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gdf6P43028 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gdf6P43028 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gdf6P43028 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Gdf6P43028 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gdf6P43028 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.25■□□□□ 0.35
Gdf6P43028 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gdf6P43028 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Gdf6P43028 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gdf6P43028 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gdf6P43028 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gdf6P43028 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Gdf6P43028 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gdf6P43028 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gdf6P43028 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gdf6P43028 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gdf6P43028 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Gdf6P43028 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.25■□□□□ 0.35
Gdf6P43028 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gdf6P43028 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Gdf6P43028 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Gdf6P43028 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Gdf6P43028 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gdf6P43028 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gdf6P43028 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gdf6P43028 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Gdf6P43028 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gdf6P43028 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gdf6P43028 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gdf6P43028 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gdf6P43028 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Gdf6P43028 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.24■□□□□ 0.35
Gdf6P43028 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gdf6P43028 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gdf6P43028 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gdf6P43028 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gdf6P43028 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Gdf6P43028 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gdf6P43028 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gdf6P43028 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gdf6P43028 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Gdf6P43028 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gdf6P43028 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gdf6P43028 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gdf6P43028 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gdf6P43028 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gdf6P43028 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gdf6P43028 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gdf6P43028 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.23■□□□□ 0.35
Gdf6P43028 Gm44771-201ENSMUST00000206975 626 ntBASIC17.23■□□□□ 0.35
Gdf6P43028 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gdf6P43028 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gdf6P43028 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gdf6P43028 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Gdf6P43028 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gdf6P43028 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gdf6P43028 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gdf6P43028 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gdf6P43028 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Gdf6P43028 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gdf6P43028 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gdf6P43028 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gdf6P43028 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gdf6P43028 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gdf6P43028 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gdf6P43028 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gdf6P43028 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Gdf6P43028 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.22■□□□□ 0.35
Gdf6P43028 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.22■□□□□ 0.35
Gdf6P43028 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.22■□□□□ 0.35
Gdf6P43028 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.22■□□□□ 0.35
Gdf6P43028 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gdf6P43028 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gdf6P43028 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gdf6P43028 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gdf6P43028 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gdf6P43028 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gdf6P43028 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.21■□□□□ 0.35
Gdf6P43028 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gdf6P43028 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gdf6P43028 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gdf6P43028 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms