Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Abca1P41233 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Abca1P41233 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.64□□□□□ -0.23
Abca1P41233 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Abca1P41233 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Abca1P41233 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Abca1P41233 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Abca1P41233 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Abca1P41233 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Abca1P41233 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.64□□□□□ -0.23
Abca1P41233 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Abca1P41233 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Abca1P41233 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Abca1P41233 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Abca1P41233 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Abca1P41233 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.63□□□□□ -0.23
Abca1P41233 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.63□□□□□ -0.23
Abca1P41233 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Abca1P41233 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Abca1P41233 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Abca1P41233 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Abca1P41233 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Abca1P41233 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Abca1P41233 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.63□□□□□ -0.23
Abca1P41233 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.63□□□□□ -0.23
Abca1P41233 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.63□□□□□ -0.23
Abca1P41233 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Abca1P41233 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Abca1P41233 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Abca1P41233 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Abca1P41233 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Abca1P41233 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Abca1P41233 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Abca1P41233 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Abca1P41233 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Abca1P41233 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Abca1P41233 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Abca1P41233 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Abca1P41233 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Abca1P41233 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Abca1P41233 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.62□□□□□ -0.23
Abca1P41233 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abca1P41233 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.62□□□□□ -0.23
Abca1P41233 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.62□□□□□ -0.23
Abca1P41233 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.62□□□□□ -0.23
Abca1P41233 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.62□□□□□ -0.23
Abca1P41233 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.62□□□□□ -0.23
Abca1P41233 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Abca1P41233 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abca1P41233 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abca1P41233 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abca1P41233 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abca1P41233 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
Abca1P41233 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abca1P41233 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Abca1P41233 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abca1P41233 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.62□□□□□ -0.23
Abca1P41233 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abca1P41233 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Abca1P41233 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abca1P41233 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abca1P41233 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abca1P41233 Phf7-203ENSMUST00000226565 1971 ntBASIC13.62□□□□□ -0.23
Abca1P41233 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC13.62□□□□□ -0.23
Abca1P41233 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abca1P41233 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Abca1P41233 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abca1P41233 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Abca1P41233 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abca1P41233 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abca1P41233 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Abca1P41233 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abca1P41233 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abca1P41233 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abca1P41233 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.61□□□□□ -0.23
Abca1P41233 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.61□□□□□ -0.23
Abca1P41233 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.61□□□□□ -0.23
Abca1P41233 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.61□□□□□ -0.23
Abca1P41233 Gm44357-201ENSMUST00000195897 142 ntBASIC13.61□□□□□ -0.23
Abca1P41233 Gm19658-201ENSMUST00000196231 138 ntBASIC13.61□□□□□ -0.23
Abca1P41233 Gm44367-201ENSMUST00000196836 138 ntBASIC13.61□□□□□ -0.23
Abca1P41233 Gm44350-201ENSMUST00000197197 138 ntBASIC13.61□□□□□ -0.23
Abca1P41233 Gm44390-201ENSMUST00000197533 144 ntBASIC13.61□□□□□ -0.23
Abca1P41233 Gm44313-201ENSMUST00000198018 138 ntBASIC13.61□□□□□ -0.23
Abca1P41233 Gm44486-201ENSMUST00000198508 138 ntBASIC13.61□□□□□ -0.23
Abca1P41233 Gm44454-201ENSMUST00000198541 138 ntBASIC13.61□□□□□ -0.23
Abca1P41233 Gm44314-201ENSMUST00000199263 138 ntBASIC13.61□□□□□ -0.23
Abca1P41233 Gm44394-201ENSMUST00000199558 138 ntBASIC13.61□□□□□ -0.23
Abca1P41233 Gm44484-201ENSMUST00000199873 138 ntBASIC13.61□□□□□ -0.23
Abca1P41233 Gm44466-201ENSMUST00000200264 138 ntBASIC13.61□□□□□ -0.23
Abca1P41233 Gm44359-201ENSMUST00000200671 138 ntBASIC13.61□□□□□ -0.23
Abca1P41233 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Abca1P41233 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Abca1P41233 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abca1P41233 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abca1P41233 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abca1P41233 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abca1P41233 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abca1P41233 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abca1P41233 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms