Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.94■□□□□ 0.3
Cxcl12P40224 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.94■□□□□ 0.3
Cxcl12P40224 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Cxcl12P40224 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cxcl12P40224 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cxcl12P40224 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cxcl12P40224 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cxcl12P40224 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cxcl12P40224 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cxcl12P40224 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cxcl12P40224 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cxcl12P40224 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cxcl12P40224 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.93■□□□□ 0.3
Cxcl12P40224 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cxcl12P40224 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cxcl12P40224 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cxcl12P40224 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cxcl12P40224 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.93■□□□□ 0.3
Cxcl12P40224 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.93■□□□□ 0.3
Cxcl12P40224 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.93■□□□□ 0.3
Cxcl12P40224 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cxcl12P40224 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cxcl12P40224 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cxcl12P40224 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cxcl12P40224 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.93■□□□□ 0.3
Cxcl12P40224 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cxcl12P40224 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.93■□□□□ 0.3
Cxcl12P40224 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cxcl12P40224 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cxcl12P40224 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cxcl12P40224 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cxcl12P40224 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Cxcl12P40224 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.92■□□□□ 0.3
Cxcl12P40224 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cxcl12P40224 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cxcl12P40224 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Cxcl12P40224 Gm11764-201ENSMUST00000120221 623 ntBASIC16.92■□□□□ 0.3
Cxcl12P40224 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cxcl12P40224 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cxcl12P40224 Mir6956-201ENSMUST00000183598 62 ntBASIC16.92■□□□□ 0.3
Cxcl12P40224 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.92■□□□□ 0.3
Cxcl12P40224 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cxcl12P40224 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cxcl12P40224 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.92■□□□□ 0.3
Cxcl12P40224 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cxcl12P40224 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Cxcl12P40224 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cxcl12P40224 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Cxcl12P40224 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.92■□□□□ 0.3
Cxcl12P40224 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Cxcl12P40224 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cxcl12P40224 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cxcl12P40224 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cxcl12P40224 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cxcl12P40224 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cxcl12P40224 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cxcl12P40224 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.91■□□□□ 0.3
Cxcl12P40224 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cxcl12P40224 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Cxcl12P40224 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.91■□□□□ 0.3
Cxcl12P40224 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Cxcl12P40224 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.91■□□□□ 0.3
Cxcl12P40224 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.91■□□□□ 0.3
Cxcl12P40224 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cxcl12P40224 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cxcl12P40224 Gm8396-201ENSMUST00000057361 823 ntBASIC16.91■□□□□ 0.3
Cxcl12P40224 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cxcl12P40224 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cxcl12P40224 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cxcl12P40224 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cxcl12P40224 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cxcl12P40224 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cxcl12P40224 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cxcl12P40224 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.9■□□□□ 0.3
Cxcl12P40224 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cxcl12P40224 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.9■□□□□ 0.3
Cxcl12P40224 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cxcl12P40224 Gm25406-201ENSMUST00000157599 105 ntBASIC16.9■□□□□ 0.3
Cxcl12P40224 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.9■□□□□ 0.3
Cxcl12P40224 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cxcl12P40224 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cxcl12P40224 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cxcl12P40224 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cxcl12P40224 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cxcl12P40224 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cxcl12P40224 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cxcl12P40224 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cxcl12P40224 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cxcl12P40224 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Cxcl12P40224 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cxcl12P40224 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Cxcl12P40224 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Cxcl12P40224 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cxcl12P40224 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cxcl12P40224 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.89■□□□□ 0.29
Cxcl12P40224 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.89■□□□□ 0.29
Cxcl12P40224 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Cxcl12P40224 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.89■□□□□ 0.29
Cxcl12P40224 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cxcl12P40224 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms