Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fen1P39749 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fen1P39749 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fen1P39749 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fen1P39749 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.61■□□□□ 0.25
Fen1P39749 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Fen1P39749 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Fen1P39749 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fen1P39749 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Fen1P39749 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fen1P39749 Gm4974-201ENSMUST00000209974 875 ntBASIC16.61■□□□□ 0.25
Fen1P39749 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fen1P39749 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fen1P39749 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fen1P39749 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fen1P39749 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fen1P39749 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Fen1P39749 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fen1P39749 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Fen1P39749 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Fen1P39749 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fen1P39749 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.6■□□□□ 0.25
Fen1P39749 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Fen1P39749 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fen1P39749 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fen1P39749 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Fen1P39749 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.6■□□□□ 0.25
Fen1P39749 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Fen1P39749 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.6■□□□□ 0.25
Fen1P39749 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Fen1P39749 Gm20049-201ENSMUST00000219950 730 ntBASIC16.6■□□□□ 0.25
Fen1P39749 Gm18025-201ENSMUST00000221733 862 ntBASIC16.6■□□□□ 0.25
Fen1P39749 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Fen1P39749 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Fen1P39749 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fen1P39749 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fen1P39749 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fen1P39749 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Fen1P39749 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fen1P39749 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fen1P39749 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.6■□□□□ 0.25
Fen1P39749 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Fen1P39749 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fen1P39749 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fen1P39749 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Fen1P39749 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fen1P39749 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fen1P39749 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fen1P39749 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fen1P39749 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Fen1P39749 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fen1P39749 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fen1P39749 Gm13168-201ENSMUST00000121771 632 ntBASIC16.59■□□□□ 0.25
Fen1P39749 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.59■□□□□ 0.25
Fen1P39749 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.59■□□□□ 0.25
Fen1P39749 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fen1P39749 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.59■□□□□ 0.25
Fen1P39749 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Fen1P39749 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fen1P39749 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.59■□□□□ 0.25
Fen1P39749 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fen1P39749 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fen1P39749 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Fen1P39749 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fen1P39749 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Fen1P39749 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Fen1P39749 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Fen1P39749 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Fen1P39749 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Fen1P39749 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Fen1P39749 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Fen1P39749 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Fen1P39749 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Fen1P39749 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Fen1P39749 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Fen1P39749 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Fen1P39749 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Fen1P39749 Gm13158-201ENSMUST00000122007 736 ntBASIC16.58■□□□□ 0.24
Fen1P39749 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.58■□□□□ 0.24
Fen1P39749 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.58■□□□□ 0.24
Fen1P39749 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Fen1P39749 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.58■□□□□ 0.24
Fen1P39749 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.58■□□□□ 0.24
Fen1P39749 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Fen1P39749 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Fen1P39749 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Fen1P39749 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Fen1P39749 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Fen1P39749 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Fen1P39749 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Fen1P39749 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.58■□□□□ 0.24
Fen1P39749 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.58■□□□□ 0.24
Fen1P39749 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Fen1P39749 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Fen1P39749 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Fen1P39749 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Fen1P39749 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Fen1P39749 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.58■□□□□ 0.24
Fen1P39749 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Fen1P39749 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms