Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.45□□□□□ -0.1
Upk2P38575 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.45□□□□□ -0.1
Upk2P38575 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk2P38575 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk2P38575 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Upk2P38575 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk2P38575 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Upk2P38575 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk2P38575 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Upk2P38575 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Upk2P38575 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.45□□□□□ -0.1
Upk2P38575 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk2P38575 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk2P38575 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk2P38575 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.44□□□□□ -0.1
Upk2P38575 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk2P38575 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk2P38575 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk2P38575 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.44□□□□□ -0.1
Upk2P38575 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk2P38575 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.44□□□□□ -0.1
Upk2P38575 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk2P38575 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk2P38575 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Upk2P38575 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Upk2P38575 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Upk2P38575 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Upk2P38575 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.44□□□□□ -0.1
Upk2P38575 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.44□□□□□ -0.1
Upk2P38575 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk2P38575 Gm21559-201ENSMUST00000220638 855 ntBASIC14.44□□□□□ -0.1
Upk2P38575 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk2P38575 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk2P38575 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
Upk2P38575 Gm8587-201ENSMUST00000076538 843 ntBASIC14.44□□□□□ -0.1
Upk2P38575 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Upk2P38575 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Upk2P38575 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Upk2P38575 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Upk2P38575 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk2P38575 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk2P38575 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk2P38575 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Upk2P38575 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk2P38575 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Upk2P38575 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk2P38575 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Upk2P38575 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk2P38575 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk2P38575 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk2P38575 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Upk2P38575 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Upk2P38575 Gm22697-201ENSMUST00000175194 63 ntBASIC14.43□□□□□ -0.1
Upk2P38575 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk2P38575 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Upk2P38575 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk2P38575 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk2P38575 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk2P38575 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Upk2P38575 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.43□□□□□ -0.1
Upk2P38575 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk2P38575 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Upk2P38575 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk2P38575 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk2P38575 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Upk2P38575 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Upk2P38575 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.42□□□□□ -0.1
Upk2P38575 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk2P38575 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Upk2P38575 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk2P38575 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Upk2P38575 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk2P38575 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk2P38575 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk2P38575 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Upk2P38575 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Upk2P38575 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.42□□□□□ -0.1
Upk2P38575 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Upk2P38575 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Upk2P38575 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk2P38575 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk2P38575 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk2P38575 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk2P38575 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk2P38575 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk2P38575 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk2P38575 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Upk2P38575 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.42□□□□□ -0.1
Upk2P38575 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Upk2P38575 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.41□□□□□ -0.1
Upk2P38575 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk2P38575 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.41□□□□□ -0.1
Upk2P38575 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Upk2P38575 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Upk2P38575 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk2P38575 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk2P38575 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk2P38575 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Upk2P38575 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Upk2P38575 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms