Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxa1P35582 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Foxa1P35582 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Foxa1P35582 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Foxa1P35582 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.22■□□□□ 0.03
Foxa1P35582 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Foxa1P35582 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.22■□□□□ 0.03
Foxa1P35582 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxa1P35582 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxa1P35582 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxa1P35582 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.22■□□□□ 0.03
Foxa1P35582 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Foxa1P35582 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Foxa1P35582 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Foxa1P35582 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Foxa1P35582 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxa1P35582 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxa1P35582 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Foxa1P35582 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Foxa1P35582 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Foxa1P35582 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.21■□□□□ 0.03
Foxa1P35582 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Foxa1P35582 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxa1P35582 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Foxa1P35582 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Foxa1P35582 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxa1P35582 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.21■□□□□ 0.03
Foxa1P35582 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Foxa1P35582 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxa1P35582 Gm25016-201ENSMUST00000158399 131 ntBASIC15.21■□□□□ 0.03
Foxa1P35582 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.21■□□□□ 0.03
Foxa1P35582 Gm6623-201ENSMUST00000173570 544 ntBASIC15.21■□□□□ 0.03
Foxa1P35582 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxa1P35582 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Foxa1P35582 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.21■□□□□ 0.03
Foxa1P35582 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Foxa1P35582 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Foxa1P35582 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxa1P35582 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.21■□□□□ 0.03
Foxa1P35582 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Foxa1P35582 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxa1P35582 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxa1P35582 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxa1P35582 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Foxa1P35582 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Foxa1P35582 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxa1P35582 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Foxa1P35582 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.21■□□□□ 0.02
Foxa1P35582 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Foxa1P35582 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Foxa1P35582 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Foxa1P35582 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Foxa1P35582 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Foxa1P35582 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Foxa1P35582 Haglr-201ENSMUST00000100000 2085 ntBASIC15.2■□□□□ 0.02
Foxa1P35582 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Foxa1P35582 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Foxa1P35582 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Foxa1P35582 Gm6345-202ENSMUST00000180900 204 ntBASIC15.2■□□□□ 0.02
Foxa1P35582 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Foxa1P35582 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Foxa1P35582 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Foxa1P35582 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Foxa1P35582 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Foxa1P35582 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Foxa1P35582 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Foxa1P35582 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Foxa1P35582 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Foxa1P35582 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.2■□□□□ 0.02
Foxa1P35582 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Foxa1P35582 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Foxa1P35582 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Foxa1P35582 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Foxa1P35582 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Foxa1P35582 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxa1P35582 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxa1P35582 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxa1P35582 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxa1P35582 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxa1P35582 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Foxa1P35582 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxa1P35582 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxa1P35582 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxa1P35582 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.19■□□□□ 0.02
Foxa1P35582 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Foxa1P35582 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxa1P35582 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxa1P35582 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Foxa1P35582 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Foxa1P35582 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxa1P35582 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxa1P35582 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Foxa1P35582 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxa1P35582 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Foxa1P35582 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxa1P35582 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxa1P35582 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Foxa1P35582 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxa1P35582 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Foxa1P35582 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms