Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.59■□□□□ 0.41
Mmp3P28862 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.59■□□□□ 0.41
Mmp3P28862 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.59■□□□□ 0.41
Mmp3P28862 Gm25745-201ENSMUST00000174945 133 ntBASIC17.59■□□□□ 0.41
Mmp3P28862 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.59■□□□□ 0.41
Mmp3P28862 Gm6296-201ENSMUST00000222599 943 ntBASIC17.59■□□□□ 0.41
Mmp3P28862 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.59■□□□□ 0.41
Mmp3P28862 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp3P28862 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp3P28862 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp3P28862 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp3P28862 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp3P28862 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp3P28862 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp3P28862 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Mmp3P28862 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Mmp3P28862 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Mmp3P28862 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Mmp3P28862 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Mmp3P28862 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Mmp3P28862 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Mmp3P28862 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp3P28862 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp3P28862 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.58■□□□□ 0.4
Mmp3P28862 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Mmp3P28862 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp3P28862 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp3P28862 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Mmp3P28862 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
Mmp3P28862 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Mmp3P28862 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp3P28862 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp3P28862 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp3P28862 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp3P28862 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp3P28862 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp3P28862 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp3P28862 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp3P28862 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp3P28862 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp3P28862 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.57■□□□□ 0.4
Mmp3P28862 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.57■□□□□ 0.4
Mmp3P28862 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.57■□□□□ 0.4
Mmp3P28862 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp3P28862 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Mmp3P28862 Gm18195-201ENSMUST00000207604 706 ntBASIC17.57■□□□□ 0.4
Mmp3P28862 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.57■□□□□ 0.4
Mmp3P28862 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp3P28862 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp3P28862 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp3P28862 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp3P28862 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp3P28862 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp3P28862 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp3P28862 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp3P28862 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp3P28862 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.57■□□□□ 0.4
Mmp3P28862 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp3P28862 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Mmp3P28862 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp3P28862 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.56■□□□□ 0.4
Mmp3P28862 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Mmp3P28862 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.56■□□□□ 0.4
Mmp3P28862 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp3P28862 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp3P28862 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.56■□□□□ 0.4
Mmp3P28862 Gm6376-201ENSMUST00000209407 580 ntBASIC17.56■□□□□ 0.4
Mmp3P28862 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp3P28862 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Mmp3P28862 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.56■□□□□ 0.4
Mmp3P28862 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.56■□□□□ 0.4
Mmp3P28862 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp3P28862 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp3P28862 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp3P28862 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp3P28862 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Mmp3P28862 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Mmp3P28862 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp3P28862 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp3P28862 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp3P28862 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Mmp3P28862 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Mmp3P28862 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.55■□□□□ 0.4
Mmp3P28862 Gm18733-201ENSMUST00000173950 856 ntBASIC17.55■□□□□ 0.4
Mmp3P28862 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp3P28862 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.55■□□□□ 0.4
Mmp3P28862 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp3P28862 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp3P28862 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp3P28862 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp3P28862 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp3P28862 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp3P28862 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp3P28862 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp3P28862 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp3P28862 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp3P28862 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp3P28862 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp3P28862 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp3P28862 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms