Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxd8P23463 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxd8P23463 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxd8P23463 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxd8P23463 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxd8P23463 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxd8P23463 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Hoxd8P23463 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxd8P23463 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxd8P23463 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.92■□□□□ 0.3
Hoxd8P23463 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxd8P23463 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.92■□□□□ 0.3
Hoxd8P23463 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Hoxd8P23463 Gm6550-201ENSMUST00000187574 993 ntBASIC16.92■□□□□ 0.3
Hoxd8P23463 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxd8P23463 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxd8P23463 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxd8P23463 Psmb5-202ENSMUST00000227257 622 ntBASIC16.92■□□□□ 0.3
Hoxd8P23463 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxd8P23463 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxd8P23463 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxd8P23463 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxd8P23463 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxd8P23463 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxd8P23463 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxd8P23463 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Hoxd8P23463 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxd8P23463 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.91■□□□□ 0.3
Hoxd8P23463 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxd8P23463 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxd8P23463 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxd8P23463 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.91■□□□□ 0.3
Hoxd8P23463 Gm5364-201ENSMUST00000216789 889 ntBASIC16.91■□□□□ 0.3
Hoxd8P23463 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxd8P23463 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxd8P23463 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxd8P23463 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Hoxd8P23463 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Hoxd8P23463 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxd8P23463 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxd8P23463 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxd8P23463 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxd8P23463 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxd8P23463 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxd8P23463 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxd8P23463 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.9■□□□□ 0.3
Hoxd8P23463 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxd8P23463 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxd8P23463 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxd8P23463 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.9■□□□□ 0.3
Hoxd8P23463 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxd8P23463 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxd8P23463 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Hoxd8P23463 Gm15173-201ENSMUST00000122049 433 ntBASIC16.9■□□□□ 0.3
Hoxd8P23463 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Hoxd8P23463 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxd8P23463 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.9■□□□□ 0.3
Hoxd8P23463 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxd8P23463 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Hoxd8P23463 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Hoxd8P23463 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxd8P23463 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxd8P23463 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxd8P23463 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxd8P23463 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxd8P23463 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxd8P23463 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxd8P23463 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxd8P23463 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxd8P23463 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxd8P23463 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxd8P23463 Rarb-207ENSMUST00000225921 2756 ntBASIC16.89■□□□□ 0.3
Hoxd8P23463 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.89■□□□□ 0.3
Hoxd8P23463 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxd8P23463 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Hoxd8P23463 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxd8P23463 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxd8P23463 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxd8P23463 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Hoxd8P23463 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Hoxd8P23463 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxd8P23463 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.89■□□□□ 0.29
Hoxd8P23463 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxd8P23463 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxd8P23463 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxd8P23463 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxd8P23463 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.89■□□□□ 0.29
Hoxd8P23463 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxd8P23463 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxd8P23463 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.88■□□□□ 0.29
Hoxd8P23463 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxd8P23463 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxd8P23463 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxd8P23463 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxd8P23463 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxd8P23463 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxd8P23463 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxd8P23463 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxd8P23463 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxd8P23463 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms