Protein–RNA interactions for Protein: P22227

Zfp42, Zinc finger protein 42, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp42P22227 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Zfp42P22227 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Zfp42P22227 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.31■□□□□ 0.36
Zfp42P22227 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Zfp42P22227 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Zfp42P22227 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Zfp42P22227 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Zfp42P22227 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Zfp42P22227 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zfp42P22227 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Zfp42P22227 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zfp42P22227 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zfp42P22227 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Zfp42P22227 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zfp42P22227 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Zfp42P22227 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zfp42P22227 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Zfp42P22227 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.3■□□□□ 0.36
Zfp42P22227 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.3■□□□□ 0.36
Zfp42P22227 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zfp42P22227 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zfp42P22227 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zfp42P22227 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Zfp42P22227 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Zfp42P22227 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zfp42P22227 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zfp42P22227 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zfp42P22227 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Zfp42P22227 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Zfp42P22227 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zfp42P22227 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Zfp42P22227 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zfp42P22227 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Zfp42P22227 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zfp42P22227 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zfp42P22227 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Zfp42P22227 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zfp42P22227 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Zfp42P22227 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zfp42P22227 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Zfp42P22227 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zfp42P22227 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.29■□□□□ 0.36
Zfp42P22227 Gm8520-201ENSMUST00000186517 868 ntBASIC17.29■□□□□ 0.36
Zfp42P22227 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.29■□□□□ 0.36
Zfp42P22227 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zfp42P22227 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Zfp42P22227 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zfp42P22227 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Zfp42P22227 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Zfp42P22227 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Zfp42P22227 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zfp42P22227 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zfp42P22227 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Zfp42P22227 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Zfp42P22227 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp42P22227 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Zfp42P22227 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp42P22227 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp42P22227 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp42P22227 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp42P22227 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp42P22227 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp42P22227 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp42P22227 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp42P22227 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp42P22227 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp42P22227 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.28■□□□□ 0.36
Zfp42P22227 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp42P22227 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Zfp42P22227 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Zfp42P22227 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp42P22227 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Zfp42P22227 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.28■□□□□ 0.36
Zfp42P22227 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp42P22227 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp42P22227 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Zfp42P22227 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Zfp42P22227 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Zfp42P22227 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Zfp42P22227 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Zfp42P22227 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.27■□□□□ 0.36
Zfp42P22227 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Zfp42P22227 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Zfp42P22227 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Zfp42P22227 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Zfp42P22227 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Zfp42P22227 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Zfp42P22227 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.27■□□□□ 0.36
Zfp42P22227 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.27■□□□□ 0.36
Zfp42P22227 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Zfp42P22227 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Zfp42P22227 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Zfp42P22227 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Zfp42P22227 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Zfp42P22227 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Zfp42P22227 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Zfp42P22227 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Zfp42P22227 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Zfp42P22227 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Zfp42P22227 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms