Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.29■□□□□ 0.36
Cd44P15379 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd44P15379 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cd44P15379 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd44P15379 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cd44P15379 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.29■□□□□ 0.36
Cd44P15379 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd44P15379 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd44P15379 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd44P15379 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cd44P15379 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd44P15379 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd44P15379 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cd44P15379 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd44P15379 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
Cd44P15379 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.29■□□□□ 0.36
Cd44P15379 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cd44P15379 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd44P15379 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd44P15379 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
Cd44P15379 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.28■□□□□ 0.36
Cd44P15379 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd44P15379 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd44P15379 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cd44P15379 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.28■□□□□ 0.36
Cd44P15379 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cd44P15379 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd44P15379 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cd44P15379 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cd44P15379 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd44P15379 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.28■□□□□ 0.36
Cd44P15379 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.28■□□□□ 0.36
Cd44P15379 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd44P15379 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cd44P15379 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cd44P15379 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cd44P15379 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd44P15379 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.28■□□□□ 0.36
Cd44P15379 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Cd44P15379 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd44P15379 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd44P15379 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cd44P15379 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cd44P15379 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd44P15379 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd44P15379 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd44P15379 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd44P15379 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd44P15379 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.27■□□□□ 0.36
Cd44P15379 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd44P15379 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd44P15379 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.27■□□□□ 0.36
Cd44P15379 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd44P15379 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd44P15379 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Cd44P15379 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cd44P15379 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd44P15379 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.27■□□□□ 0.36
Cd44P15379 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.27■□□□□ 0.36
Cd44P15379 Gm21814-202ENSMUST00000203277 873 ntBASIC17.27■□□□□ 0.36
Cd44P15379 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd44P15379 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Cd44P15379 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd44P15379 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd44P15379 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd44P15379 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cd44P15379 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cd44P15379 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cd44P15379 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cd44P15379 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cd44P15379 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd44P15379 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd44P15379 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cd44P15379 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cd44P15379 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd44P15379 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd44P15379 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.26■□□□□ 0.35
Cd44P15379 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
Cd44P15379 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.26■□□□□ 0.35
Cd44P15379 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.26■□□□□ 0.35
Cd44P15379 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd44P15379 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd44P15379 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd44P15379 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd44P15379 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd44P15379 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cd44P15379 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cd44P15379 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd44P15379 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cd44P15379 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd44P15379 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd44P15379 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cd44P15379 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Cd44P15379 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd44P15379 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.25■□□□□ 0.35
Cd44P15379 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cd44P15379 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.25■□□□□ 0.35
Cd44P15379 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.25■□□□□ 0.35
Cd44P15379 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.25■□□□□ 0.35
Cd44P15379 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms