Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Srp54P14576 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Srp54P14576 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Srp54P14576 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Srp54P14576 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Srp54P14576 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Srp54P14576 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Srp54P14576 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Srp54P14576 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Srp54P14576 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Srp54P14576 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Srp54P14576 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Srp54P14576 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.16■□□□□ 0.18
Srp54P14576 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.16■□□□□ 0.18
Srp54P14576 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Srp54P14576 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Srp54P14576 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Srp54P14576 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Srp54P14576 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Srp54P14576 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Srp54P14576 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.15■□□□□ 0.18
Srp54P14576 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Srp54P14576 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.15■□□□□ 0.18
Srp54P14576 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Srp54P14576 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Srp54P14576 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Srp54P14576 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Srp54P14576 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Srp54P14576 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Srp54P14576 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Srp54P14576 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Srp54P14576 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.15■□□□□ 0.18
Srp54P14576 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Srp54P14576 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.15■□□□□ 0.18
Srp54P14576 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Srp54P14576 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Srp54P14576 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
Srp54P14576 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Srp54P14576 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Srp54P14576 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Srp54P14576 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Srp54P14576 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Srp54P14576 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Srp54P14576 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Srp54P14576 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Srp54P14576 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Srp54P14576 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.14■□□□□ 0.17
Srp54P14576 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.14■□□□□ 0.17
Srp54P14576 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.14■□□□□ 0.17
Srp54P14576 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Srp54P14576 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.14■□□□□ 0.17
Srp54P14576 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Srp54P14576 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Srp54P14576 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Srp54P14576 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.14■□□□□ 0.17
Srp54P14576 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Srp54P14576 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Srp54P14576 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Srp54P14576 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Srp54P14576 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Srp54P14576 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Srp54P14576 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Srp54P14576 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.13■□□□□ 0.17
Srp54P14576 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.13■□□□□ 0.17
Srp54P14576 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.13■□□□□ 0.17
Srp54P14576 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.13■□□□□ 0.17
Srp54P14576 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Srp54P14576 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Srp54P14576 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Srp54P14576 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Srp54P14576 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Srp54P14576 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Srp54P14576 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Srp54P14576 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Srp54P14576 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Srp54P14576 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.13■□□□□ 0.17
Srp54P14576 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Srp54P14576 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Srp54P14576 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54P14576 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.12■□□□□ 0.17
Srp54P14576 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.12■□□□□ 0.17
Srp54P14576 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54P14576 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54P14576 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54P14576 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Srp54P14576 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54P14576 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.12■□□□□ 0.17
Srp54P14576 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.12■□□□□ 0.17
Srp54P14576 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54P14576 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54P14576 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54P14576 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54P14576 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54P14576 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54P14576 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.12■□□□□ 0.17
Srp54P14576 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54P14576 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54P14576 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54P14576 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54P14576 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms