Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.07□□□□□ -0.48
P06328 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
P06328 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
P06328 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.06□□□□□ -0.48
P06328 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P06328 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P06328 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P06328 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P06328 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
P06328 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.06□□□□□ -0.48
P06328 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
P06328 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P06328 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P06328 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P06328 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.06□□□□□ -0.48
P06328 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P06328 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
P06328 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
P06328 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.06□□□□□ -0.48
P06328 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
P06328 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P06328 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.06□□□□□ -0.48
P06328 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.06□□□□□ -0.48
P06328 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
P06328 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
P06328 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06328 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
P06328 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06328 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
P06328 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06328 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06328 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
P06328 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06328 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06328 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06328 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06328 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
P06328 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.05□□□□□ -0.48
P06328 Gm29257-201ENSMUST00000186115 639 ntBASIC12.05□□□□□ -0.48
P06328 Odf3b-204ENSMUST00000227834 930 ntBASIC12.05□□□□□ -0.48
P06328 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
P06328 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06328 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06328 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06328 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06328 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
P06328 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06328 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06328 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06328 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06328 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06328 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
P06328 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.05□□□□□ -0.48
P06328 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.05□□□□□ -0.48
P06328 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06328 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06328 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06328 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
P06328 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06328 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
P06328 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.04□□□□□ -0.48
P06328 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.04□□□□□ -0.48
P06328 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
P06328 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
P06328 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06328 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
P06328 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06328 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
P06328 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
P06328 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06328 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06328 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06328 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06328 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06328 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06328 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06328 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06328 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.04□□□□□ -0.48
P06328 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
P06328 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06328 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06328 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P06328 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06328 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P06328 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06328 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
P06328 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06328 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
P06328 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P06328 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms