Protein–RNA interactions for Protein: P04944

Ig kappa chain V-VI region NQ5-78.2.6, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04944 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04944 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04944 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04944 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04944 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04944 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P04944 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
P04944 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.78□□□□□ -0.36
P04944 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04944 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.78□□□□□ -0.36
P04944 Gm7213-201ENSMUST00000215977 950 ntBASIC12.78□□□□□ -0.36
P04944 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.78□□□□□ -0.36
P04944 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04944 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
P04944 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P04944 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
P04944 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04944 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04944 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04944 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04944 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04944 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04944 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04944 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04944 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04944 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04944 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04944 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.78□□□□□ -0.36
P04944 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
P04944 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.77□□□□□ -0.36
P04944 AC154231.1-201ENSMUST00000220564 2175 ntBASIC12.77□□□□□ -0.36
P04944 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
P04944 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
P04944 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.77□□□□□ -0.36
P04944 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
P04944 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
P04944 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.77□□□□□ -0.36
P04944 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04944 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.77□□□□□ -0.37
P04944 Gm13436-201ENSMUST00000120418 567 ntBASIC12.77□□□□□ -0.37
P04944 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P04944 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.77□□□□□ -0.37
P04944 Gm36967-201ENSMUST00000193814 266 ntBASIC12.77□□□□□ -0.37
P04944 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P04944 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04944 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04944 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04944 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04944 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04944 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04944 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P04944 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P04944 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04944 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P04944 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P04944 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04944 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.76□□□□□ -0.37
P04944 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.76□□□□□ -0.37
P04944 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
P04944 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04944 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04944 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.76□□□□□ -0.37
P04944 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04944 Gm11336-201ENSMUST00000118168 334 ntBASIC12.76□□□□□ -0.37
P04944 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.76□□□□□ -0.37
P04944 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.76□□□□□ -0.37
P04944 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
P04944 Mir1668-201ENSMUST00000184114 107 ntBASIC12.76□□□□□ -0.37
P04944 Spcs1-207ENSMUST00000228767 1008 ntBASIC12.76□□□□□ -0.37
P04944 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.76□□□□□ -0.37
P04944 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
P04944 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04944 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04944 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04944 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04944 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04944 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04944 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
P04944 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
P04944 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.76□□□□□ -0.37
P04944 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
P04944 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
P04944 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04944 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
P04944 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04944 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04944 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
P04944 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
P04944 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.75□□□□□ -0.37
P04944 Gm13559-201ENSMUST00000120476 863 ntBASIC12.75□□□□□ -0.37
P04944 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
P04944 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.75□□□□□ -0.37
P04944 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.75□□□□□ -0.37
P04944 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.75□□□□□ -0.37
P04944 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.75□□□□□ -0.37
P04944 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.75□□□□□ -0.37
P04944 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.75□□□□□ -0.37
P04944 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.75□□□□□ -0.37
P04944 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
P04944 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms