Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa3P02831 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa3P02831 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa3P02831 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa3P02831 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa3P02831 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa3P02831 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.8□□□□□ -0.2
Hoxa3P02831 Gm28033-201ENSMUST00000184224 96 ntBASIC13.8□□□□□ -0.2
Hoxa3P02831 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.8□□□□□ -0.2
Hoxa3P02831 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.8□□□□□ -0.2
Hoxa3P02831 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa3P02831 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa3P02831 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa3P02831 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.8□□□□□ -0.2
Hoxa3P02831 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Hoxa3P02831 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Hoxa3P02831 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Hoxa3P02831 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.8□□□□□ -0.2
Hoxa3P02831 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa3P02831 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa3P02831 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa3P02831 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa3P02831 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxa3P02831 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.79□□□□□ -0.2
Hoxa3P02831 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa3P02831 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Hoxa3P02831 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa3P02831 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa3P02831 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Hoxa3P02831 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa3P02831 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa3P02831 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa3P02831 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.79□□□□□ -0.2
Hoxa3P02831 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa3P02831 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa3P02831 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.79□□□□□ -0.2
Hoxa3P02831 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa3P02831 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Hoxa3P02831 Gm27742-201ENSMUST00000184667 60 ntBASIC13.79□□□□□ -0.2
Hoxa3P02831 Gm17807-201ENSMUST00000186869 298 ntBASIC13.79□□□□□ -0.2
Hoxa3P02831 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa3P02831 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa3P02831 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa3P02831 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa3P02831 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Hoxa3P02831 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa3P02831 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa3P02831 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa3P02831 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa3P02831 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa3P02831 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa3P02831 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.79□□□□□ -0.2
Hoxa3P02831 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxa3P02831 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa3P02831 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa3P02831 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa3P02831 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa3P02831 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa3P02831 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa3P02831 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa3P02831 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa3P02831 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa3P02831 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa3P02831 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa3P02831 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Hoxa3P02831 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa3P02831 Gm11336-201ENSMUST00000118168 334 ntBASIC13.78□□□□□ -0.2
Hoxa3P02831 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa3P02831 Gm27741-201ENSMUST00000185060 237 ntBASIC13.78□□□□□ -0.2
Hoxa3P02831 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa3P02831 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.78□□□□□ -0.2
Hoxa3P02831 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa3P02831 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa3P02831 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa3P02831 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa3P02831 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Hoxa3P02831 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa3P02831 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa3P02831 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxa3P02831 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hoxa3P02831 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hoxa3P02831 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hoxa3P02831 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Hoxa3P02831 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Hoxa3P02831 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Hoxa3P02831 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.77□□□□□ -0.21
Hoxa3P02831 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxa3P02831 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxa3P02831 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxa3P02831 Olfr129-201ENSMUST00000122318 993 ntBASIC13.77□□□□□ -0.21
Hoxa3P02831 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxa3P02831 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.77□□□□□ -0.21
Hoxa3P02831 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.77□□□□□ -0.21
Hoxa3P02831 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxa3P02831 Gm17971-201ENSMUST00000190239 806 ntBASIC13.77□□□□□ -0.21
Hoxa3P02831 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.77□□□□□ -0.21
Hoxa3P02831 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxa3P02831 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxa3P02831 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Hoxa3P02831 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 116.4 ms