Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Syn1O88935 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Syn1O88935 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Syn1O88935 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Syn1O88935 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Syn1O88935 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Syn1O88935 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Syn1O88935 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Syn1O88935 Gm11025-201ENSMUST00000140773 466 ntBASIC16.91■□□□□ 0.3
Syn1O88935 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.91■□□□□ 0.3
Syn1O88935 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Syn1O88935 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.91■□□□□ 0.3
Syn1O88935 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.91■□□□□ 0.3
Syn1O88935 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Syn1O88935 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Syn1O88935 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Syn1O88935 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Syn1O88935 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.91■□□□□ 0.3
Syn1O88935 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Syn1O88935 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Syn1O88935 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Syn1O88935 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.9■□□□□ 0.3
Syn1O88935 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Syn1O88935 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.9■□□□□ 0.3
Syn1O88935 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Syn1O88935 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Syn1O88935 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Syn1O88935 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Syn1O88935 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Syn1O88935 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.9■□□□□ 0.3
Syn1O88935 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Syn1O88935 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.9■□□□□ 0.3
Syn1O88935 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.9■□□□□ 0.3
Syn1O88935 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Syn1O88935 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Syn1O88935 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.9■□□□□ 0.3
Syn1O88935 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Syn1O88935 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.9■□□□□ 0.3
Syn1O88935 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Syn1O88935 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Syn1O88935 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Syn1O88935 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Syn1O88935 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Syn1O88935 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Syn1O88935 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Syn1O88935 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Syn1O88935 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Syn1O88935 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Syn1O88935 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Syn1O88935 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.89■□□□□ 0.3
Syn1O88935 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.89■□□□□ 0.29
Syn1O88935 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Syn1O88935 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Syn1O88935 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Syn1O88935 Gm8969-201ENSMUST00000199694 526 ntBASIC16.89■□□□□ 0.29
Syn1O88935 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.89■□□□□ 0.29
Syn1O88935 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Syn1O88935 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Syn1O88935 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.89■□□□□ 0.29
Syn1O88935 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Syn1O88935 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Syn1O88935 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Syn1O88935 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syn1O88935 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syn1O88935 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.88■□□□□ 0.29
Syn1O88935 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Syn1O88935 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syn1O88935 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Syn1O88935 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syn1O88935 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Syn1O88935 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Syn1O88935 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Syn1O88935 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syn1O88935 Mir8117-201ENSMUST00000184773 107 ntBASIC16.88■□□□□ 0.29
Syn1O88935 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.88■□□□□ 0.29
Syn1O88935 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Syn1O88935 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.88■□□□□ 0.29
Syn1O88935 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syn1O88935 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Syn1O88935 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Syn1O88935 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syn1O88935 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.88■□□□□ 0.29
Syn1O88935 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syn1O88935 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syn1O88935 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syn1O88935 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Syn1O88935 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syn1O88935 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syn1O88935 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syn1O88935 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syn1O88935 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syn1O88935 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Syn1O88935 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syn1O88935 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.87■□□□□ 0.29
Syn1O88935 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syn1O88935 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.87■□□□□ 0.29
Syn1O88935 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syn1O88935 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
Syn1O88935 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Syn1O88935 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms