Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ShdO88834 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ShdO88834 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ShdO88834 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ShdO88834 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
ShdO88834 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ShdO88834 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ShdO88834 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ShdO88834 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ShdO88834 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ShdO88834 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ShdO88834 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ShdO88834 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.83■□□□□ 0.28
ShdO88834 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.83■□□□□ 0.28
ShdO88834 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ShdO88834 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ShdO88834 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.83■□□□□ 0.28
ShdO88834 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ShdO88834 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ShdO88834 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ShdO88834 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ShdO88834 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ShdO88834 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ShdO88834 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.82■□□□□ 0.28
ShdO88834 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ShdO88834 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShdO88834 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.82■□□□□ 0.28
ShdO88834 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShdO88834 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShdO88834 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ShdO88834 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.82■□□□□ 0.28
ShdO88834 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShdO88834 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShdO88834 Gm10013-201ENSMUST00000106074 672 ntBASIC16.82■□□□□ 0.28
ShdO88834 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ShdO88834 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ShdO88834 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ShdO88834 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.82■□□□□ 0.28
ShdO88834 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.82■□□□□ 0.28
ShdO88834 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.82■□□□□ 0.28
ShdO88834 Gm37722-201ENSMUST00000193757 208 ntBASIC16.82■□□□□ 0.28
ShdO88834 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.82■□□□□ 0.28
ShdO88834 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ShdO88834 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ShdO88834 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShdO88834 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShdO88834 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ShdO88834 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShdO88834 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ShdO88834 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ShdO88834 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
ShdO88834 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShdO88834 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.81■□□□□ 0.28
ShdO88834 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
ShdO88834 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShdO88834 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShdO88834 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ShdO88834 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ShdO88834 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ShdO88834 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShdO88834 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShdO88834 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShdO88834 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ShdO88834 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ShdO88834 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
ShdO88834 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShdO88834 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShdO88834 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ShdO88834 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShdO88834 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
ShdO88834 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ShdO88834 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShdO88834 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ShdO88834 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ShdO88834 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
ShdO88834 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ShdO88834 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShdO88834 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShdO88834 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.79■□□□□ 0.28
ShdO88834 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShdO88834 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShdO88834 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShdO88834 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShdO88834 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShdO88834 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
ShdO88834 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShdO88834 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShdO88834 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ShdO88834 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.79■□□□□ 0.28
ShdO88834 Gm6659-201ENSMUST00000174752 547 ntBASIC16.79■□□□□ 0.28
ShdO88834 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.79■□□□□ 0.28
ShdO88834 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ShdO88834 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShdO88834 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShdO88834 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ShdO88834 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShdO88834 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ShdO88834 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
ShdO88834 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ShdO88834 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms