Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gm6296-201ENSMUST00000222599 943 ntBASIC14.09□□□□□ -0.15
Cldn1O88551 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn1O88551 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cldn1O88551 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
Cldn1O88551 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn1O88551 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn1O88551 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn1O88551 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Cldn1O88551 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn1O88551 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn1O88551 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn1O88551 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cldn1O88551 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.08□□□□□ -0.15
Cldn1O88551 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.08□□□□□ -0.16
Cldn1O88551 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn1O88551 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn1O88551 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn1O88551 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn1O88551 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn1O88551 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn1O88551 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.08□□□□□ -0.16
Cldn1O88551 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.08□□□□□ -0.16
Cldn1O88551 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
Cldn1O88551 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.08□□□□□ -0.16
Cldn1O88551 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn1O88551 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.08□□□□□ -0.16
Cldn1O88551 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.08□□□□□ -0.16
Cldn1O88551 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn1O88551 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.08□□□□□ -0.16
Cldn1O88551 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn1O88551 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn1O88551 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn1O88551 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn1O88551 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn1O88551 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn1O88551 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn1O88551 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn1O88551 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn1O88551 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn1O88551 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cldn1O88551 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn1O88551 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn1O88551 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn1O88551 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn1O88551 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn1O88551 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn1O88551 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Cldn1O88551 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn1O88551 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn1O88551 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn1O88551 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.07□□□□□ -0.16
Cldn1O88551 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.07□□□□□ -0.16
Cldn1O88551 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.07□□□□□ -0.16
Cldn1O88551 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn1O88551 Gm2213-201ENSMUST00000197485 688 ntBASIC14.07□□□□□ -0.16
Cldn1O88551 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.07□□□□□ -0.16
Cldn1O88551 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.07□□□□□ -0.16
Cldn1O88551 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn1O88551 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Cldn1O88551 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Cldn1O88551 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Cldn1O88551 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn1O88551 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn1O88551 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.07□□□□□ -0.16
Cldn1O88551 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn1O88551 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn1O88551 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn1O88551 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cldn1O88551 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cldn1O88551 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn1O88551 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cldn1O88551 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Cldn1O88551 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cldn1O88551 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn1O88551 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn1O88551 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn1O88551 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn1O88551 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn1O88551 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn1O88551 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn1O88551 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.06□□□□□ -0.16
Cldn1O88551 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cldn1O88551 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn1O88551 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.06□□□□□ -0.16
Cldn1O88551 Gm5364-201ENSMUST00000216789 889 ntBASIC14.06□□□□□ -0.16
Cldn1O88551 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn1O88551 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn1O88551 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn1O88551 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.06□□□□□ -0.16
Cldn1O88551 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn1O88551 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cldn1O88551 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn1O88551 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn1O88551 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn1O88551 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cldn1O88551 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn1O88551 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn1O88551 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn1O88551 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn1O88551 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms