Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Dnmt3aO88508 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Dnmt3aO88508 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Dnmt3aO88508 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Dnmt3aO88508 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Dnmt3aO88508 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Dnmt3aO88508 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Dnmt3aO88508 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Dnmt3aO88508 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dnmt3aO88508 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dnmt3aO88508 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
Dnmt3aO88508 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.54■□□□□ 0.24
Dnmt3aO88508 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Dnmt3aO88508 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Dnmt3aO88508 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Dnmt3aO88508 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Dnmt3aO88508 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.54■□□□□ 0.24
Dnmt3aO88508 Gm18115-201ENSMUST00000221209 621 ntBASIC16.54■□□□□ 0.24
Dnmt3aO88508 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.54■□□□□ 0.24
Dnmt3aO88508 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dnmt3aO88508 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Dnmt3aO88508 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Dnmt3aO88508 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.54■□□□□ 0.24
Dnmt3aO88508 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dnmt3aO88508 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.54■□□□□ 0.24
Dnmt3aO88508 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Dnmt3aO88508 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Dnmt3aO88508 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dnmt3aO88508 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Dnmt3aO88508 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dnmt3aO88508 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dnmt3aO88508 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Gm11336-201ENSMUST00000118168 334 ntBASIC16.53■□□□□ 0.24
Dnmt3aO88508 AA414768-201ENSMUST00000121924 1257 ntBASIC16.53■□□□□ 0.24
Dnmt3aO88508 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.53■□□□□ 0.24
Dnmt3aO88508 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Dnmt3aO88508 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Dnmt3aO88508 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.52■□□□□ 0.24
Dnmt3aO88508 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Dnmt3aO88508 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Dnmt3aO88508 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Dnmt3aO88508 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Dnmt3aO88508 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Dnmt3aO88508 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Dnmt3aO88508 Gm37722-201ENSMUST00000193757 208 ntBASIC16.52■□□□□ 0.24
Dnmt3aO88508 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Dnmt3aO88508 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Dnmt3aO88508 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.52■□□□□ 0.24
Dnmt3aO88508 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Dnmt3aO88508 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Dnmt3aO88508 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Dnmt3aO88508 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.52■□□□□ 0.23
Dnmt3aO88508 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dnmt3aO88508 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Dnmt3aO88508 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Dnmt3aO88508 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dnmt3aO88508 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Dnmt3aO88508 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dnmt3aO88508 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dnmt3aO88508 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dnmt3aO88508 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dnmt3aO88508 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dnmt3aO88508 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Dnmt3aO88508 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dnmt3aO88508 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.51■□□□□ 0.23
Dnmt3aO88508 Gm9013-201ENSMUST00000132939 882 ntBASIC16.51■□□□□ 0.23
Dnmt3aO88508 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.51■□□□□ 0.23
Dnmt3aO88508 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dnmt3aO88508 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dnmt3aO88508 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dnmt3aO88508 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms