Protein–RNA interactions for Protein: O88410

Cxcr3, C-X-C chemokine receptor type 3, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr3O88410 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.51■□□□□ 0.23
Cxcr3O88410 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cxcr3O88410 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.51■□□□□ 0.23
Cxcr3O88410 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cxcr3O88410 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cxcr3O88410 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cxcr3O88410 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cxcr3O88410 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Cxcr3O88410 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cxcr3O88410 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.51■□□□□ 0.23
Cxcr3O88410 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cxcr3O88410 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Cxcr3O88410 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cxcr3O88410 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cxcr3O88410 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcr3O88410 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcr3O88410 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcr3O88410 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcr3O88410 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcr3O88410 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Cxcr3O88410 Gm28033-201ENSMUST00000184224 96 ntBASIC16.5■□□□□ 0.23
Cxcr3O88410 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcr3O88410 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.5■□□□□ 0.23
Cxcr3O88410 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcr3O88410 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcr3O88410 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcr3O88410 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcr3O88410 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcr3O88410 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcr3O88410 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcr3O88410 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcr3O88410 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcr3O88410 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
Cxcr3O88410 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcr3O88410 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcr3O88410 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cxcr3O88410 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcr3O88410 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcr3O88410 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.49■□□□□ 0.23
Cxcr3O88410 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcr3O88410 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcr3O88410 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcr3O88410 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcr3O88410 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cxcr3O88410 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcr3O88410 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcr3O88410 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcr3O88410 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cxcr3O88410 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.49■□□□□ 0.23
Cxcr3O88410 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Cxcr3O88410 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.49■□□□□ 0.23
Cxcr3O88410 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcr3O88410 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcr3O88410 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcr3O88410 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcr3O88410 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcr3O88410 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcr3O88410 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcr3O88410 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcr3O88410 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cxcr3O88410 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcr3O88410 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcr3O88410 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcr3O88410 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcr3O88410 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cxcr3O88410 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcr3O88410 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.48■□□□□ 0.23
Cxcr3O88410 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cxcr3O88410 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cxcr3O88410 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cxcr3O88410 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Cxcr3O88410 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.48■□□□□ 0.23
Cxcr3O88410 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cxcr3O88410 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cxcr3O88410 Gm45328-201ENSMUST00000210942 917 ntBASIC16.48■□□□□ 0.23
Cxcr3O88410 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.48■□□□□ 0.23
Cxcr3O88410 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cxcr3O88410 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cxcr3O88410 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cxcr3O88410 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cxcr3O88410 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cxcr3O88410 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cxcr3O88410 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cxcr3O88410 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cxcr3O88410 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cxcr3O88410 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cxcr3O88410 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cxcr3O88410 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.47■□□□□ 0.23
Cxcr3O88410 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cxcr3O88410 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cxcr3O88410 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.47■□□□□ 0.23
Cxcr3O88410 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.47■□□□□ 0.23
Cxcr3O88410 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.47■□□□□ 0.23
Cxcr3O88410 Gm18669-201ENSMUST00000216049 778 ntBASIC16.47■□□□□ 0.23
Cxcr3O88410 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cxcr3O88410 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cxcr3O88410 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cxcr3O88410 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cxcr3O88410 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cxcr3O88410 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms