Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Gm10226O88253 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10226O88253 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10226O88253 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10226O88253 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Gm10226O88253 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10226O88253 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10226O88253 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10226O88253 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10226O88253 Gm12895-201ENSMUST00000122214 226 ntBASIC12.67□□□□□ -0.38
Gm10226O88253 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10226O88253 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10226O88253 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.67□□□□□ -0.38
Gm10226O88253 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.67□□□□□ -0.38
Gm10226O88253 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10226O88253 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10226O88253 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10226O88253 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.67□□□□□ -0.38
Gm10226O88253 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Gm10226O88253 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10226O88253 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10226O88253 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10226O88253 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10226O88253 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10226O88253 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Gm10226O88253 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Gm10226O88253 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Gm10226O88253 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10226O88253 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Gm10226O88253 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Gm10226O88253 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10226O88253 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10226O88253 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10226O88253 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12.66□□□□□ -0.38
Gm10226O88253 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10226O88253 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10226O88253 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10226O88253 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Gm10226O88253 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10226O88253 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10226O88253 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Gm10226O88253 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Gm10226O88253 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.66□□□□□ -0.38
Gm10226O88253 Gm15372-201ENSMUST00000120729 834 ntBASIC12.66□□□□□ -0.38
Gm10226O88253 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.66□□□□□ -0.38
Gm10226O88253 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
Gm10226O88253 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.66□□□□□ -0.38
Gm10226O88253 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10226O88253 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10226O88253 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10226O88253 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10226O88253 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10226O88253 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10226O88253 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10226O88253 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Gm10226O88253 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10226O88253 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10226O88253 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10226O88253 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Gm10226O88253 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10226O88253 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10226O88253 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10226O88253 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10226O88253 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10226O88253 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10226O88253 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10226O88253 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10226O88253 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10226O88253 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Gm10226O88253 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10226O88253 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10226O88253 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10226O88253 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10226O88253 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.65□□□□□ -0.38
Gm10226O88253 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10226O88253 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Gm10226O88253 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.65□□□□□ -0.38
Gm10226O88253 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10226O88253 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Gm10226O88253 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Gm10226O88253 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Gm10226O88253 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Gm10226O88253 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.65□□□□□ -0.38
Gm10226O88253 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.65□□□□□ -0.38
Gm10226O88253 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10226O88253 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10226O88253 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10226O88253 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10226O88253 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Gm10226O88253 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10226O88253 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10226O88253 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10226O88253 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Gm10226O88253 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Gm10226O88253 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10226O88253 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10226O88253 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10226O88253 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10226O88253 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Gm10226O88253 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms