Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Ubr1O70481 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ubr1O70481 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ubr1O70481 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Ubr1O70481 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Ubr1O70481 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ubr1O70481 Gm43338-201ENSMUST00000198617 2223 ntBASIC21.26■□□□□ 0.99
Ubr1O70481 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ubr1O70481 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ubr1O70481 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ubr1O70481 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ubr1O70481 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC21.26■□□□□ 0.99
Ubr1O70481 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC21.26■□□□□ 0.99
Ubr1O70481 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ubr1O70481 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ubr1O70481 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ubr1O70481 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ubr1O70481 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ubr1O70481 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ubr1O70481 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ubr1O70481 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ubr1O70481 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC21.25■□□□□ 0.99
Ubr1O70481 Gm8839-201ENSMUST00000121279 1645 ntBASIC21.25■□□□□ 0.99
Ubr1O70481 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ubr1O70481 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ubr1O70481 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ubr1O70481 Rarb-207ENSMUST00000225921 2756 ntBASIC21.25■□□□□ 0.99
Ubr1O70481 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ubr1O70481 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ubr1O70481 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ubr1O70481 Gm43575-201ENSMUST00000196420 516 ntBASIC21.25■□□□□ 0.99
Ubr1O70481 Gm43702-201ENSMUST00000198772 2546 ntBASIC21.25■□□□□ 0.99
Ubr1O70481 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ubr1O70481 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ubr1O70481 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ubr1O70481 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ubr1O70481 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ubr1O70481 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Ubr1O70481 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Ubr1O70481 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ubr1O70481 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ubr1O70481 Gm23935-201ENSMUST00000102303 57 ntBASIC21.24■□□□□ 0.99
Ubr1O70481 Gm24270-201ENSMUST00000102326 57 ntBASIC21.24■□□□□ 0.99
Ubr1O70481 Gm24245-201ENSMUST00000157318 57 ntBASIC21.24■□□□□ 0.99
Ubr1O70481 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ubr1O70481 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC21.24■□□□□ 0.99
Ubr1O70481 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ubr1O70481 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ubr1O70481 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ubr1O70481 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ubr1O70481 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ubr1O70481 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ubr1O70481 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ubr1O70481 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Ubr1O70481 Gm6598-201ENSMUST00000202719 2615 ntBASIC21.23■□□□□ 0.99
Ubr1O70481 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ubr1O70481 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ubr1O70481 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ubr1O70481 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC21.23■□□□□ 0.99
Ubr1O70481 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC21.23■□□□□ 0.99
Ubr1O70481 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC21.23■□□□□ 0.99
Ubr1O70481 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ubr1O70481 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ubr1O70481 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ubr1O70481 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ubr1O70481 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ubr1O70481 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC21.23■□□□□ 0.99
Ubr1O70481 Gm14822-201ENSMUST00000122247 291 ntBASIC21.23■□□□□ 0.99
Ubr1O70481 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC21.23■□□□□ 0.99
Ubr1O70481 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ubr1O70481 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ubr1O70481 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ubr1O70481 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC21.22■□□□□ 0.99
Ubr1O70481 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ubr1O70481 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ubr1O70481 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Ubr1O70481 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC21.22■□□□□ 0.99
Ubr1O70481 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ubr1O70481 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ubr1O70481 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ubr1O70481 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC21.22■□□□□ 0.99
Ubr1O70481 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC21.22■□□□□ 0.99
Ubr1O70481 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Ubr1O70481 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Ubr1O70481 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
Ubr1O70481 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ubr1O70481 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ubr1O70481 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ubr1O70481 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ubr1O70481 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC21.21■□□□□ 0.99
Ubr1O70481 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC21.21■□□□□ 0.99
Ubr1O70481 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC21.21■□□□□ 0.99
Ubr1O70481 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ubr1O70481 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ubr1O70481 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC21.21■□□□□ 0.99
Ubr1O70481 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC21.21■□□□□ 0.99
Ubr1O70481 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ubr1O70481 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC21.2■□□□□ 0.99
Ubr1O70481 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC21.2■□□□□ 0.99
Ubr1O70481 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC21.2■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms