Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.39■□□□□ 0.37
Pja1O55176 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Pja1O55176 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pja1O55176 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pja1O55176 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Pja1O55176 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pja1O55176 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pja1O55176 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Pja1O55176 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pja1O55176 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pja1O55176 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pja1O55176 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.38■□□□□ 0.37
Pja1O55176 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
Pja1O55176 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.38■□□□□ 0.37
Pja1O55176 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pja1O55176 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pja1O55176 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.38■□□□□ 0.37
Pja1O55176 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pja1O55176 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.38■□□□□ 0.37
Pja1O55176 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pja1O55176 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pja1O55176 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.38■□□□□ 0.37
Pja1O55176 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pja1O55176 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pja1O55176 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.37■□□□□ 0.37
Pja1O55176 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pja1O55176 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pja1O55176 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pja1O55176 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pja1O55176 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Pja1O55176 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pja1O55176 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.37■□□□□ 0.37
Pja1O55176 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pja1O55176 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pja1O55176 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.37■□□□□ 0.37
Pja1O55176 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pja1O55176 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pja1O55176 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pja1O55176 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pja1O55176 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pja1O55176 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pja1O55176 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pja1O55176 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pja1O55176 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pja1O55176 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pja1O55176 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pja1O55176 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
Pja1O55176 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pja1O55176 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pja1O55176 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pja1O55176 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pja1O55176 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pja1O55176 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pja1O55176 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pja1O55176 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.36■□□□□ 0.37
Pja1O55176 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Pja1O55176 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pja1O55176 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pja1O55176 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pja1O55176 Gm21814-202ENSMUST00000203277 873 ntBASIC17.36■□□□□ 0.37
Pja1O55176 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pja1O55176 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Pja1O55176 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pja1O55176 Phf7-203ENSMUST00000226565 1971 ntBASIC17.36■□□□□ 0.37
Pja1O55176 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pja1O55176 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pja1O55176 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pja1O55176 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pja1O55176 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pja1O55176 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pja1O55176 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pja1O55176 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pja1O55176 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pja1O55176 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.35■□□□□ 0.37
Pja1O55176 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pja1O55176 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pja1O55176 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pja1O55176 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pja1O55176 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pja1O55176 Gm715-201ENSMUST00000117865 831 ntBASIC17.35■□□□□ 0.37
Pja1O55176 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pja1O55176 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pja1O55176 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.35■□□□□ 0.37
Pja1O55176 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.35■□□□□ 0.37
Pja1O55176 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.35■□□□□ 0.37
Pja1O55176 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.35■□□□□ 0.37
Pja1O55176 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pja1O55176 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pja1O55176 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pja1O55176 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.35■□□□□ 0.37
Pja1O55176 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.35■□□□□ 0.37
Pja1O55176 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pja1O55176 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pja1O55176 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.35■□□□□ 0.37
Pja1O55176 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pja1O55176 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pja1O55176 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pja1O55176 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pja1O55176 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pja1O55176 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms