Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6dO55057 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6dO55057 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Pde6dO55057 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6dO55057 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6dO55057 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6dO55057 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6dO55057 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pde6dO55057 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6dO55057 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6dO55057 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6dO55057 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pde6dO55057 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.03□□□□□ -0.32
Pde6dO55057 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6dO55057 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6dO55057 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6dO55057 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pde6dO55057 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6dO55057 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6dO55057 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pde6dO55057 Gm45417-201ENSMUST00000209533 758 ntBASIC13.03□□□□□ -0.32
Pde6dO55057 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.03□□□□□ -0.32
Pde6dO55057 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.03□□□□□ -0.32
Pde6dO55057 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pde6dO55057 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6dO55057 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pde6dO55057 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pde6dO55057 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.03□□□□□ -0.32
Pde6dO55057 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6dO55057 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Pde6dO55057 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6dO55057 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Pde6dO55057 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6dO55057 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6dO55057 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pde6dO55057 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pde6dO55057 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pde6dO55057 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pde6dO55057 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pde6dO55057 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pde6dO55057 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Pde6dO55057 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pde6dO55057 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pde6dO55057 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pde6dO55057 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pde6dO55057 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pde6dO55057 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.02□□□□□ -0.33
Pde6dO55057 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pde6dO55057 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC13.02□□□□□ -0.33
Pde6dO55057 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.02□□□□□ -0.33
Pde6dO55057 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pde6dO55057 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pde6dO55057 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pde6dO55057 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pde6dO55057 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Pde6dO55057 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pde6dO55057 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pde6dO55057 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.02□□□□□ -0.33
Pde6dO55057 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pde6dO55057 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pde6dO55057 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pde6dO55057 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Pde6dO55057 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pde6dO55057 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pde6dO55057 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pde6dO55057 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pde6dO55057 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.02□□□□□ -0.33
Pde6dO55057 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.02□□□□□ -0.33
Pde6dO55057 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Pde6dO55057 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Pde6dO55057 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6dO55057 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6dO55057 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6dO55057 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6dO55057 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6dO55057 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6dO55057 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Pde6dO55057 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pde6dO55057 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC13.01□□□□□ -0.33
Pde6dO55057 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6dO55057 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Pde6dO55057 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC13.01□□□□□ -0.33
Pde6dO55057 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6dO55057 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pde6dO55057 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6dO55057 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Pde6dO55057 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6dO55057 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6dO55057 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6dO55057 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6dO55057 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6dO55057 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6dO55057 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6dO55057 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6dO55057 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Pde6dO55057 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6dO55057 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6dO55057 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6dO55057 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pde6dO55057 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms