Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Cacna1bO55017 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1bO55017 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1bO55017 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Cacna1bO55017 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1bO55017 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1bO55017 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cacna1bO55017 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Cacna1bO55017 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.84■□□□□ 0.13
Cacna1bO55017 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1bO55017 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1bO55017 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1bO55017 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1bO55017 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1bO55017 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.84■□□□□ 0.13
Cacna1bO55017 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.84■□□□□ 0.13
Cacna1bO55017 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1bO55017 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1bO55017 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Cacna1bO55017 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1bO55017 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1bO55017 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1bO55017 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Cacna1bO55017 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Cacna1bO55017 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1bO55017 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Cacna1bO55017 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.84■□□□□ 0.13
Cacna1bO55017 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1bO55017 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1bO55017 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.84■□□□□ 0.13
Cacna1bO55017 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.84■□□□□ 0.13
Cacna1bO55017 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1bO55017 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.84■□□□□ 0.13
Cacna1bO55017 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1bO55017 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cacna1bO55017 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cacna1bO55017 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Cacna1bO55017 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.83■□□□□ 0.13
Cacna1bO55017 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1bO55017 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Cacna1bO55017 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.83■□□□□ 0.12
Cacna1bO55017 Chchd1-203ENSMUST00000224633 557 ntBASIC15.83■□□□□ 0.12
Cacna1bO55017 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.83■□□□□ 0.12
Cacna1bO55017 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.83■□□□□ 0.12
Cacna1bO55017 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1bO55017 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1bO55017 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Cacna1bO55017 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1bO55017 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1bO55017 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.83■□□□□ 0.12
Cacna1bO55017 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1bO55017 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1bO55017 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1bO55017 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.83■□□□□ 0.12
Cacna1bO55017 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1bO55017 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1bO55017 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.83■□□□□ 0.12
Cacna1bO55017 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1bO55017 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.83■□□□□ 0.12
Cacna1bO55017 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1bO55017 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1bO55017 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1bO55017 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Cacna1bO55017 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Cacna1bO55017 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cacna1bO55017 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1bO55017 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.82■□□□□ 0.12
Cacna1bO55017 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1bO55017 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.82■□□□□ 0.12
Cacna1bO55017 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1bO55017 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1bO55017 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1bO55017 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cacna1bO55017 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1bO55017 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1bO55017 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.82■□□□□ 0.12
Cacna1bO55017 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1bO55017 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.82■□□□□ 0.12
Cacna1bO55017 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.82■□□□□ 0.12
Cacna1bO55017 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.82■□□□□ 0.12
Cacna1bO55017 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1bO55017 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Cacna1bO55017 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1bO55017 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1bO55017 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1bO55017 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Cacna1bO55017 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1bO55017 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1bO55017 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1bO55017 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1bO55017 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1bO55017 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1bO55017 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.81■□□□□ 0.12
Cacna1bO55017 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cacna1bO55017 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.81■□□□□ 0.12
Cacna1bO55017 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1bO55017 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1bO55017 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1bO55017 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.81■□□□□ 0.12
Cacna1bO55017 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms