Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smarce1O54941 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarce1O54941 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Smarce1O54941 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarce1O54941 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.57■□□□□ 0.72
Smarce1O54941 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarce1O54941 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarce1O54941 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smarce1O54941 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smarce1O54941 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Smarce1O54941 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarce1O54941 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarce1O54941 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarce1O54941 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarce1O54941 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarce1O54941 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarce1O54941 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC19.56■□□□□ 0.72
Smarce1O54941 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarce1O54941 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smarce1O54941 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.56■□□□□ 0.72
Smarce1O54941 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarce1O54941 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarce1O54941 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.56■□□□□ 0.72
Smarce1O54941 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smarce1O54941 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smarce1O54941 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.56■□□□□ 0.72
Smarce1O54941 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.56■□□□□ 0.72
Smarce1O54941 Gm715-201ENSMUST00000117865 831 ntBASIC19.56■□□□□ 0.72
Smarce1O54941 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.56■□□□□ 0.72
Smarce1O54941 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarce1O54941 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smarce1O54941 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarce1O54941 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarce1O54941 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarce1O54941 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarce1O54941 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarce1O54941 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarce1O54941 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Smarce1O54941 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Smarce1O54941 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarce1O54941 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Smarce1O54941 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.55■□□□□ 0.72
Smarce1O54941 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarce1O54941 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarce1O54941 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarce1O54941 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarce1O54941 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.55■□□□□ 0.72
Smarce1O54941 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Smarce1O54941 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smarce1O54941 Gm27463-201ENSMUST00000183569 57 ntBASIC19.55■□□□□ 0.72
Smarce1O54941 Gm8520-201ENSMUST00000186517 868 ntBASIC19.55■□□□□ 0.72
Smarce1O54941 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarce1O54941 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarce1O54941 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarce1O54941 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC19.55■□□□□ 0.72
Smarce1O54941 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarce1O54941 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarce1O54941 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarce1O54941 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarce1O54941 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarce1O54941 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarce1O54941 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
Smarce1O54941 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarce1O54941 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smarce1O54941 Gm13186-201ENSMUST00000118031 316 ntBASIC19.54■□□□□ 0.72
Smarce1O54941 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.54■□□□□ 0.72
Smarce1O54941 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarce1O54941 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.54■□□□□ 0.72
Smarce1O54941 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarce1O54941 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarce1O54941 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Smarce1O54941 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarce1O54941 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smarce1O54941 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarce1O54941 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarce1O54941 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarce1O54941 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smarce1O54941 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarce1O54941 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Smarce1O54941 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Smarce1O54941 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarce1O54941 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Smarce1O54941 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarce1O54941 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.53■□□□□ 0.72
Smarce1O54941 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smarce1O54941 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarce1O54941 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smarce1O54941 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.53■□□□□ 0.72
Smarce1O54941 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.53■□□□□ 0.72
Smarce1O54941 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarce1O54941 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarce1O54941 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarce1O54941 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarce1O54941 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarce1O54941 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarce1O54941 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.53■□□□□ 0.72
Smarce1O54941 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC19.53■□□□□ 0.72
Smarce1O54941 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Smarce1O54941 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smarce1O54941 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms