Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Stx1aO35526 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Stx1aO35526 Gm37856-201ENSMUST00000191634 999 ntBASIC18.54■□□□□ 0.56
Stx1aO35526 Trmt13-210ENSMUST00000198454 880 ntBASIC18.54■□□□□ 0.56
Stx1aO35526 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Stx1aO35526 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Stx1aO35526 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Stx1aO35526 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Stx1aO35526 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Stx1aO35526 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.54■□□□□ 0.56
Stx1aO35526 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Stx1aO35526 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Stx1aO35526 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Stx1aO35526 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Stx1aO35526 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Stx1aO35526 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Stx1aO35526 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Stx1aO35526 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Stx1aO35526 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Stx1aO35526 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Stx1aO35526 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.53■□□□□ 0.56
Stx1aO35526 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Stx1aO35526 Gm38027-201ENSMUST00000192315 235 ntBASIC18.53■□□□□ 0.56
Stx1aO35526 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Stx1aO35526 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Stx1aO35526 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Stx1aO35526 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Stx1aO35526 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Stx1aO35526 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Stx1aO35526 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Stx1aO35526 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.53■□□□□ 0.56
Stx1aO35526 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Stx1aO35526 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Stx1aO35526 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Stx1aO35526 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Stx1aO35526 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Stx1aO35526 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Stx1aO35526 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Stx1aO35526 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Stx1aO35526 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.52■□□□□ 0.56
Stx1aO35526 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Stx1aO35526 Gm12441-201ENSMUST00000121806 588 ntBASIC18.52■□□□□ 0.56
Stx1aO35526 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Stx1aO35526 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Stx1aO35526 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Stx1aO35526 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Stx1aO35526 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Stx1aO35526 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Stx1aO35526 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Stx1aO35526 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Stx1aO35526 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Stx1aO35526 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Stx1aO35526 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Stx1aO35526 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Stx1aO35526 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Stx1aO35526 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Stx1aO35526 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Stx1aO35526 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Stx1aO35526 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Stx1aO35526 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Stx1aO35526 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Stx1aO35526 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Stx1aO35526 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Stx1aO35526 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Stx1aO35526 Gm15378-201ENSMUST00000121894 207 ntBASIC18.51■□□□□ 0.55
Stx1aO35526 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.51■□□□□ 0.55
Stx1aO35526 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.51■□□□□ 0.55
Stx1aO35526 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Stx1aO35526 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Stx1aO35526 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Stx1aO35526 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Stx1aO35526 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Stx1aO35526 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Stx1aO35526 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Stx1aO35526 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.51■□□□□ 0.55
Stx1aO35526 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Stx1aO35526 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Stx1aO35526 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Stx1aO35526 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Stx1aO35526 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Stx1aO35526 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Stx1aO35526 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Stx1aO35526 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Stx1aO35526 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Stx1aO35526 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Stx1aO35526 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Stx1aO35526 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.5■□□□□ 0.55
Stx1aO35526 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.5■□□□□ 0.55
Stx1aO35526 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Stx1aO35526 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Stx1aO35526 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Stx1aO35526 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.5■□□□□ 0.55
Stx1aO35526 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Stx1aO35526 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.5■□□□□ 0.55
Stx1aO35526 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.5■□□□□ 0.55
Stx1aO35526 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Stx1aO35526 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Stx1aO35526 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Stx1aO35526 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stx1aO35526 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms