Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.68■□□□□ 0.1
Clk3O35492 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clk3O35492 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.68■□□□□ 0.1
Clk3O35492 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk3O35492 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk3O35492 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk3O35492 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clk3O35492 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk3O35492 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Clk3O35492 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk3O35492 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clk3O35492 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Clk3O35492 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.67■□□□□ 0.1
Clk3O35492 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Clk3O35492 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk3O35492 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk3O35492 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.67■□□□□ 0.1
Clk3O35492 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.67■□□□□ 0.1
Clk3O35492 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clk3O35492 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk3O35492 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk3O35492 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clk3O35492 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk3O35492 Gm30025-201ENSMUST00000218555 728 ntBASIC15.67■□□□□ 0.1
Clk3O35492 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk3O35492 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk3O35492 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk3O35492 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk3O35492 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk3O35492 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.67■□□□□ 0.1
Clk3O35492 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk3O35492 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Clk3O35492 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk3O35492 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk3O35492 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk3O35492 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clk3O35492 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clk3O35492 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk3O35492 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk3O35492 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk3O35492 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clk3O35492 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clk3O35492 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clk3O35492 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk3O35492 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.66■□□□□ 0.1
Clk3O35492 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk3O35492 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk3O35492 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.66■□□□□ 0.1
Clk3O35492 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clk3O35492 Gm10252-201ENSMUST00000209541 832 ntBASIC15.66■□□□□ 0.1
Clk3O35492 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Clk3O35492 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clk3O35492 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk3O35492 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk3O35492 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk3O35492 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk3O35492 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk3O35492 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.66■□□□□ 0.1
Clk3O35492 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk3O35492 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk3O35492 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk3O35492 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.66■□□□□ 0.1
Clk3O35492 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Clk3O35492 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk3O35492 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clk3O35492 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Clk3O35492 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk3O35492 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk3O35492 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clk3O35492 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Clk3O35492 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Clk3O35492 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clk3O35492 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clk3O35492 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Clk3O35492 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Clk3O35492 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clk3O35492 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Clk3O35492 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
Clk3O35492 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clk3O35492 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clk3O35492 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clk3O35492 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.65■□□□□ 0.1
Clk3O35492 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clk3O35492 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.65■□□□□ 0.1
Clk3O35492 Mir6982-201ENSMUST00000184354 68 ntBASIC15.65■□□□□ 0.1
Clk3O35492 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clk3O35492 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Clk3O35492 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.65■□□□□ 0.1
Clk3O35492 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clk3O35492 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clk3O35492 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Clk3O35492 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clk3O35492 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clk3O35492 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clk3O35492 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clk3O35492 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clk3O35492 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clk3O35492 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clk3O35492 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clk3O35492 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms