Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.93■□□□□ 0.3
Trove2O08848 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trove2O08848 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trove2O08848 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.93■□□□□ 0.3
Trove2O08848 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trove2O08848 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trove2O08848 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trove2O08848 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trove2O08848 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trove2O08848 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trove2O08848 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.92■□□□□ 0.3
Trove2O08848 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trove2O08848 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trove2O08848 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trove2O08848 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trove2O08848 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.92■□□□□ 0.3
Trove2O08848 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trove2O08848 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.92■□□□□ 0.3
Trove2O08848 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.92■□□□□ 0.3
Trove2O08848 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trove2O08848 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.92■□□□□ 0.3
Trove2O08848 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trove2O08848 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.92■□□□□ 0.3
Trove2O08848 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trove2O08848 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trove2O08848 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trove2O08848 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trove2O08848 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trove2O08848 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trove2O08848 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trove2O08848 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.91■□□□□ 0.3
Trove2O08848 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trove2O08848 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trove2O08848 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trove2O08848 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trove2O08848 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trove2O08848 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trove2O08848 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.91■□□□□ 0.3
Trove2O08848 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.91■□□□□ 0.3
Trove2O08848 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.91■□□□□ 0.3
Trove2O08848 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trove2O08848 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trove2O08848 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.91■□□□□ 0.3
Trove2O08848 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.91■□□□□ 0.3
Trove2O08848 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trove2O08848 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Trove2O08848 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trove2O08848 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trove2O08848 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Trove2O08848 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trove2O08848 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trove2O08848 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trove2O08848 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trove2O08848 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.91■□□□□ 0.3
Trove2O08848 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trove2O08848 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trove2O08848 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trove2O08848 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trove2O08848 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trove2O08848 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trove2O08848 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trove2O08848 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trove2O08848 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trove2O08848 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trove2O08848 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Trove2O08848 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trove2O08848 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trove2O08848 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Trove2O08848 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.9■□□□□ 0.3
Trove2O08848 Gm15378-201ENSMUST00000121894 207 ntBASIC16.9■□□□□ 0.3
Trove2O08848 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trove2O08848 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.9■□□□□ 0.3
Trove2O08848 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trove2O08848 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.9■□□□□ 0.3
Trove2O08848 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trove2O08848 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trove2O08848 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trove2O08848 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trove2O08848 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trove2O08848 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trove2O08848 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Trove2O08848 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trove2O08848 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.89■□□□□ 0.3
Trove2O08848 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trove2O08848 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trove2O08848 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trove2O08848 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trove2O08848 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trove2O08848 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trove2O08848 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trove2O08848 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trove2O08848 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trove2O08848 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trove2O08848 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.89■□□□□ 0.29
Trove2O08848 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.89■□□□□ 0.29
Trove2O08848 Gm37292-201ENSMUST00000192062 758 ntBASIC16.89■□□□□ 0.29
Trove2O08848 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trove2O08848 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trove2O08848 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Trove2O08848 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms