Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim34bJ3QNR8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim34bJ3QNR8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim34bJ3QNR8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim34bJ3QNR8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim34bJ3QNR8 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC20.09■□□□□ 0.81
Trim34bJ3QNR8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.09■□□□□ 0.81
Trim34bJ3QNR8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim34bJ3QNR8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim34bJ3QNR8 Gm18733-201ENSMUST00000173950 856 ntBASIC20.09■□□□□ 0.81
Trim34bJ3QNR8 AC161829.1-201ENSMUST00000220298 281 ntBASIC20.09■□□□□ 0.81
Trim34bJ3QNR8 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.09■□□□□ 0.81
Trim34bJ3QNR8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Trim34bJ3QNR8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim34bJ3QNR8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim34bJ3QNR8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim34bJ3QNR8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim34bJ3QNR8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim34bJ3QNR8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim34bJ3QNR8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Trim34bJ3QNR8 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trim34bJ3QNR8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20.08■□□□□ 0.81
Trim34bJ3QNR8 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trim34bJ3QNR8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Trim34bJ3QNR8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim34bJ3QNR8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trim34bJ3QNR8 Gm25745-201ENSMUST00000174945 133 ntBASIC20.08■□□□□ 0.81
Trim34bJ3QNR8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
Trim34bJ3QNR8 Gm6443-201ENSMUST00000203599 874 ntBASIC20.08■□□□□ 0.81
Trim34bJ3QNR8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim34bJ3QNR8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim34bJ3QNR8 Gm6296-201ENSMUST00000222599 943 ntBASIC20.08■□□□□ 0.81
Trim34bJ3QNR8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Trim34bJ3QNR8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trim34bJ3QNR8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trim34bJ3QNR8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim34bJ3QNR8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim34bJ3QNR8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Trim34bJ3QNR8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
Trim34bJ3QNR8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Trim34bJ3QNR8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Trim34bJ3QNR8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trim34bJ3QNR8 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim34bJ3QNR8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim34bJ3QNR8 Gm36967-201ENSMUST00000193814 266 ntBASIC20.07■□□□□ 0.8
Trim34bJ3QNR8 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim34bJ3QNR8 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim34bJ3QNR8 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim34bJ3QNR8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim34bJ3QNR8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim34bJ3QNR8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim34bJ3QNR8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
Trim34bJ3QNR8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Trim34bJ3QNR8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim34bJ3QNR8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Gm7507-201ENSMUST00000183053 1008 ntBASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Gm44357-201ENSMUST00000195897 142 ntBASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Gm19658-201ENSMUST00000196231 138 ntBASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Gm44367-201ENSMUST00000196836 138 ntBASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Gm44350-201ENSMUST00000197197 138 ntBASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Gm44390-201ENSMUST00000197533 144 ntBASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Gm44313-201ENSMUST00000198018 138 ntBASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Gm44486-201ENSMUST00000198508 138 ntBASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Gm43514-201ENSMUST00000198852 424 ntBASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Gm44314-201ENSMUST00000199263 138 ntBASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Gm44394-201ENSMUST00000199558 138 ntBASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Gm44484-201ENSMUST00000199873 138 ntBASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Gm44466-201ENSMUST00000200264 138 ntBASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Gm44359-201ENSMUST00000200671 138 ntBASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Trim34bJ3QNR8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim34bJ3QNR8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Trim34bJ3QNR8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim34bJ3QNR8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim34bJ3QNR8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim34bJ3QNR8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim34bJ3QNR8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim34bJ3QNR8 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim34bJ3QNR8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim34bJ3QNR8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC20.05■□□□□ 0.8
Trim34bJ3QNR8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Trim34bJ3QNR8 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim34bJ3QNR8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim34bJ3QNR8 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC20.05■□□□□ 0.8
Trim34bJ3QNR8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms