Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Golph3-202ENSMUST00000226517 2359 ntBASIC18.79■□□□□ 0.6
Nkx1-1G3UXB3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx1-1G3UXB3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx1-1G3UXB3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Nkx1-1G3UXB3 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx1-1G3UXB3 Tceal9-202ENSMUST00000113115 888 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Nkx1-1G3UXB3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC18.79■□□□□ 0.6
Nkx1-1G3UXB3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Nkx1-1G3UXB3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.79■□□□□ 0.6
Nkx1-1G3UXB3 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC18.79■□□□□ 0.6
Nkx1-1G3UXB3 Gm44430-201ENSMUST00000203376 995 ntBASIC18.79■□□□□ 0.6
Nkx1-1G3UXB3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx1-1G3UXB3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx1-1G3UXB3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC18.79■□□□□ 0.6
Nkx1-1G3UXB3 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx1-1G3UXB3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx1-1G3UXB3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nkx1-1G3UXB3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx1-1G3UXB3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx1-1G3UXB3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx1-1G3UXB3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx1-1G3UXB3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Nkx1-1G3UXB3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC18.78■□□□□ 0.6
Nkx1-1G3UXB3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Nkx1-1G3UXB3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.78■□□□□ 0.6
Nkx1-1G3UXB3 Gm44335-201ENSMUST00000196879 141 ntBASIC18.78■□□□□ 0.6
Nkx1-1G3UXB3 Gm44297-201ENSMUST00000198304 141 ntBASIC18.78■□□□□ 0.6
Nkx1-1G3UXB3 Gm44346-201ENSMUST00000198851 141 ntBASIC18.78■□□□□ 0.6
Nkx1-1G3UXB3 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Nkx1-1G3UXB3 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx1-1G3UXB3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx1-1G3UXB3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx1-1G3UXB3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx1-1G3UXB3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.78■□□□□ 0.6
Nkx1-1G3UXB3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx1-1G3UXB3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx1-1G3UXB3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx1-1G3UXB3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx1-1G3UXB3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-1G3UXB3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Nkx1-1G3UXB3 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.77■□□□□ 0.6
Nkx1-1G3UXB3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-1G3UXB3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-1G3UXB3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-1G3UXB3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-1G3UXB3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-1G3UXB3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-1G3UXB3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-1G3UXB3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-1G3UXB3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-1G3UXB3 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.77■□□□□ 0.6
Nkx1-1G3UXB3 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-1G3UXB3 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Nkx1-1G3UXB3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.77■□□□□ 0.6
Nkx1-1G3UXB3 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Nkx1-1G3UXB3 Gm43811-201ENSMUST00000202862 695 ntBASIC18.77■□□□□ 0.6
Nkx1-1G3UXB3 AC132433.1-201ENSMUST00000221553 1101 ntBASIC18.77■□□□□ 0.6
Nkx1-1G3UXB3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-1G3UXB3 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-1G3UXB3 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Nkx1-1G3UXB3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Nkx1-1G3UXB3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-1G3UXB3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-1G3UXB3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-1G3UXB3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx1-1G3UXB3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx1-1G3UXB3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx1-1G3UXB3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Nkx1-1G3UXB3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx1-1G3UXB3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Nkx1-1G3UXB3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx1-1G3UXB3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx1-1G3UXB3 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx1-1G3UXB3 Gm18421-201ENSMUST00000204122 625 ntBASIC18.76■□□□□ 0.59
Nkx1-1G3UXB3 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx1-1G3UXB3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.76■□□□□ 0.59
Nkx1-1G3UXB3 Cdk7-205ENSMUST00000225990 1159 ntBASIC18.76■□□□□ 0.59
Nkx1-1G3UXB3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx1-1G3UXB3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Nkx1-1G3UXB3 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx1-1G3UXB3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Nkx1-1G3UXB3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Nkx1-1G3UXB3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx1-1G3UXB3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx1-1G3UXB3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.76■□□□□ 0.59
Nkx1-1G3UXB3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Nkx1-1G3UXB3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.76■□□□□ 0.59
Nkx1-1G3UXB3 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-1G3UXB3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-1G3UXB3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-1G3UXB3 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.75■□□□□ 0.59
Nkx1-1G3UXB3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-1G3UXB3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Nkx1-1G3UXB3 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-1G3UXB3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-1G3UXB3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-1G3UXB3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-1G3UXB3 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC18.75■□□□□ 0.59
Nkx1-1G3UXB3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx1-1G3UXB3 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms