Protein–RNA interactions for Protein: F7BCN9

Gm28038, Predicted gene, 28038 (Fragment), mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28038F7BCN9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28038F7BCN9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28038F7BCN9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28038F7BCN9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28038F7BCN9 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28038F7BCN9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28038F7BCN9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.24□□□□□ -0.45
Gm28038F7BCN9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28038F7BCN9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.24□□□□□ -0.45
Gm28038F7BCN9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.24□□□□□ -0.45
Gm28038F7BCN9 Gm2594-201ENSMUST00000214774 742 ntBASIC12.24□□□□□ -0.45
Gm28038F7BCN9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.24□□□□□ -0.45
Gm28038F7BCN9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Gm28038F7BCN9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.24□□□□□ -0.45
Gm28038F7BCN9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28038F7BCN9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28038F7BCN9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28038F7BCN9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28038F7BCN9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28038F7BCN9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28038F7BCN9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Gm28038F7BCN9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.24□□□□□ -0.45
Gm28038F7BCN9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28038F7BCN9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28038F7BCN9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28038F7BCN9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Gm28038F7BCN9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28038F7BCN9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gm28038F7BCN9 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gm28038F7BCN9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm28038F7BCN9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm28038F7BCN9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Gm28038F7BCN9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm28038F7BCN9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm28038F7BCN9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.22□□□□□ -0.45
Gm28038F7BCN9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm28038F7BCN9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.22□□□□□ -0.45
Gm28038F7BCN9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
Gm28038F7BCN9 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.22□□□□□ -0.45
Gm28038F7BCN9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm28038F7BCN9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm28038F7BCN9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm28038F7BCN9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm28038F7BCN9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm28038F7BCN9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm28038F7BCN9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm28038F7BCN9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm28038F7BCN9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm28038F7BCN9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms