Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12-1A0N8R1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12-1A0N8R1 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.75□□□□□ -0.21
Trav12-1A0N8R1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12-1A0N8R1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12-1A0N8R1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav12-1A0N8R1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12-1A0N8R1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12-1A0N8R1 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12-1A0N8R1 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12-1A0N8R1 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12-1A0N8R1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12-1A0N8R1 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Odf3b-204ENSMUST00000227834 930 ntBASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav12-1A0N8R1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav12-1A0N8R1 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav12-1A0N8R1 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav12-1A0N8R1 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav12-1A0N8R1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav12-1A0N8R1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Trav12-1A0N8R1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav12-1A0N8R1 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Trav12-1A0N8R1 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.73□□□□□ -0.21
Trav12-1A0N8R1 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav12-1A0N8R1 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav12-1A0N8R1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.73□□□□□ -0.21
Trav12-1A0N8R1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.73□□□□□ -0.21
Trav12-1A0N8R1 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav12-1A0N8R1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav12-1A0N8R1 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Trav12-1A0N8R1 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav12-1A0N8R1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav12-1A0N8R1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav12-1A0N8R1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav12-1A0N8R1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav12-1A0N8R1 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav12-1A0N8R1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav12-1A0N8R1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav12-1A0N8R1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Trav12-1A0N8R1 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12-1A0N8R1 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12-1A0N8R1 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12-1A0N8R1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12-1A0N8R1 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12-1A0N8R1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12-1A0N8R1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12-1A0N8R1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12-1A0N8R1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12-1A0N8R1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.72□□□□□ -0.21
Trav12-1A0N8R1 Gm13186-201ENSMUST00000118031 316 ntBASIC13.72□□□□□ -0.21
Trav12-1A0N8R1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav12-1A0N8R1 Gm20760-201ENSMUST00000179197 648 ntBASIC13.72□□□□□ -0.21
Trav12-1A0N8R1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav12-1A0N8R1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.72□□□□□ -0.21
Trav12-1A0N8R1 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.72□□□□□ -0.21
Trav12-1A0N8R1 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12-1A0N8R1 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12-1A0N8R1 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav12-1A0N8R1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms