Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 Gfra2-202ENSMUST00000227633 1480 ntBASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trbv13-2A0A140T8N6 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 AC134329.2-201ENSMUST00000217897 428 ntBASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Gm26596-201ENSMUST00000180464 2655 ntBASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Zkscan3-208ENSMUST00000224820 5398 ntBASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trbv13-2A0A140T8N6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-2A0A140T8N6 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-2A0A140T8N6 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-2A0A140T8N6 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-2A0A140T8N6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-2A0A140T8N6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-2A0A140T8N6 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-2A0A140T8N6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-2A0A140T8N6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-2A0A140T8N6 Gm26039-201ENSMUST00000158152 144 ntBASIC11.46□□□□□ -0.57
Trbv13-2A0A140T8N6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC11.46□□□□□ -0.57
Trbv13-2A0A140T8N6 Mir7071-201ENSMUST00000184847 69 ntBASIC11.46□□□□□ -0.57
Trbv13-2A0A140T8N6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC11.46□□□□□ -0.57
Trbv13-2A0A140T8N6 Gm18115-201ENSMUST00000221209 621 ntBASIC11.46□□□□□ -0.57
Trbv13-2A0A140T8N6 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-2A0A140T8N6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-2A0A140T8N6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-2A0A140T8N6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-2A0A140T8N6 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-2A0A140T8N6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trbv13-2A0A140T8N6 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC11.46□□□□□ -0.58
Trbv13-2A0A140T8N6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trbv13-2A0A140T8N6 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trbv13-2A0A140T8N6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trbv13-2A0A140T8N6 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trbv13-2A0A140T8N6 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trbv13-2A0A140T8N6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trbv13-2A0A140T8N6 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Trbv13-2A0A140T8N6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC11.46□□□□□ -0.58
Trbv13-2A0A140T8N6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv13-2A0A140T8N6 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv13-2A0A140T8N6 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv13-2A0A140T8N6 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv13-2A0A140T8N6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trbv13-2A0A140T8N6 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv13-2A0A140T8N6 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv13-2A0A140T8N6 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC11.45□□□□□ -0.58
Trbv13-2A0A140T8N6 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv13-2A0A140T8N6 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC11.45□□□□□ -0.58
Trbv13-2A0A140T8N6 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv13-2A0A140T8N6 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trbv13-2A0A140T8N6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms