Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfap99A0A140LIX9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfap99A0A140LIX9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Cfap99A0A140LIX9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfap99A0A140LIX9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.65■□□□□ 0.74
Cfap99A0A140LIX9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfap99A0A140LIX9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Cfap99A0A140LIX9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cfap99A0A140LIX9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cfap99A0A140LIX9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cfap99A0A140LIX9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Cfap99A0A140LIX9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cfap99A0A140LIX9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cfap99A0A140LIX9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cfap99A0A140LIX9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cfap99A0A140LIX9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.64■□□□□ 0.73
Cfap99A0A140LIX9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cfap99A0A140LIX9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfap99A0A140LIX9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cfap99A0A140LIX9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfap99A0A140LIX9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cfap99A0A140LIX9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cfap99A0A140LIX9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfap99A0A140LIX9 Gm27459-201ENSMUST00000184860 107 ntBASIC19.63■□□□□ 0.73
Cfap99A0A140LIX9 Gm5864-201ENSMUST00000202263 970 ntBASIC19.63■□□□□ 0.73
Cfap99A0A140LIX9 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.63■□□□□ 0.73
Cfap99A0A140LIX9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.63■□□□□ 0.73
Cfap99A0A140LIX9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cfap99A0A140LIX9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfap99A0A140LIX9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfap99A0A140LIX9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cfap99A0A140LIX9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap99A0A140LIX9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap99A0A140LIX9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap99A0A140LIX9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap99A0A140LIX9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.62■□□□□ 0.73
Cfap99A0A140LIX9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap99A0A140LIX9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.62■□□□□ 0.73
Cfap99A0A140LIX9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap99A0A140LIX9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap99A0A140LIX9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.62■□□□□ 0.73
Cfap99A0A140LIX9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.62■□□□□ 0.73
Cfap99A0A140LIX9 Mir8098-201ENSMUST00000184011 137 ntBASIC19.62■□□□□ 0.73
Cfap99A0A140LIX9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.62■□□□□ 0.73
Cfap99A0A140LIX9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap99A0A140LIX9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap99A0A140LIX9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap99A0A140LIX9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap99A0A140LIX9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap99A0A140LIX9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap99A0A140LIX9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cfap99A0A140LIX9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.61■□□□□ 0.73
Cfap99A0A140LIX9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cfap99A0A140LIX9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cfap99A0A140LIX9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cfap99A0A140LIX9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cfap99A0A140LIX9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cfap99A0A140LIX9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cfap99A0A140LIX9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cfap99A0A140LIX9 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cfap99A0A140LIX9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.61■□□□□ 0.73
Cfap99A0A140LIX9 Gm11336-201ENSMUST00000118168 334 ntBASIC19.61■□□□□ 0.73
Cfap99A0A140LIX9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Cfap99A0A140LIX9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Cfap99A0A140LIX9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.61■□□□□ 0.73
Cfap99A0A140LIX9 Gm43347-201ENSMUST00000200226 580 ntBASIC19.61■□□□□ 0.73
Cfap99A0A140LIX9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cfap99A0A140LIX9 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cfap99A0A140LIX9 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.61■□□□□ 0.73
Cfap99A0A140LIX9 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.61■□□□□ 0.73
Cfap99A0A140LIX9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Cfap99A0A140LIX9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cfap99A0A140LIX9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Cfap99A0A140LIX9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfap99A0A140LIX9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfap99A0A140LIX9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfap99A0A140LIX9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfap99A0A140LIX9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfap99A0A140LIX9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfap99A0A140LIX9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfap99A0A140LIX9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.6■□□□□ 0.73
Cfap99A0A140LIX9 Gm12895-201ENSMUST00000122214 226 ntBASIC19.6■□□□□ 0.73
Cfap99A0A140LIX9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.6■□□□□ 0.73
Cfap99A0A140LIX9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Cfap99A0A140LIX9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfap99A0A140LIX9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfap99A0A140LIX9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfap99A0A140LIX9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfap99A0A140LIX9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cfap99A0A140LIX9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cfap99A0A140LIX9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cfap99A0A140LIX9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cfap99A0A140LIX9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cfap99A0A140LIX9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Cfap99A0A140LIX9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cfap99A0A140LIX9 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cfap99A0A140LIX9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.59■□□□□ 0.73
Cfap99A0A140LIX9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cfap99A0A140LIX9 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cfap99A0A140LIX9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms