Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ccdc194A0A140LIT1 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc194A0A140LIT1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc194A0A140LIT1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc194A0A140LIT1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc194A0A140LIT1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc194A0A140LIT1 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.4■□□□□ 0.22
Ccdc194A0A140LIT1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc194A0A140LIT1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc194A0A140LIT1 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.4■□□□□ 0.22
Ccdc194A0A140LIT1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.4■□□□□ 0.22
Ccdc194A0A140LIT1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc194A0A140LIT1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc194A0A140LIT1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc194A0A140LIT1 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc194A0A140LIT1 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Ccdc194A0A140LIT1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc194A0A140LIT1 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.22
Ccdc194A0A140LIT1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Ccdc194A0A140LIT1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.39■□□□□ 0.21
Ccdc194A0A140LIT1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Ccdc194A0A140LIT1 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc194A0A140LIT1 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ccdc194A0A140LIT1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc194A0A140LIT1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc194A0A140LIT1 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc194A0A140LIT1 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc194A0A140LIT1 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc194A0A140LIT1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.39■□□□□ 0.21
Ccdc194A0A140LIT1 Gm22240-201ENSMUST00000175225 82 ntBASIC16.39■□□□□ 0.21
Ccdc194A0A140LIT1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc194A0A140LIT1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc194A0A140LIT1 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Ccdc194A0A140LIT1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.39■□□□□ 0.21
Ccdc194A0A140LIT1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc194A0A140LIT1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Ccdc194A0A140LIT1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc194A0A140LIT1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc194A0A140LIT1 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc194A0A140LIT1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc194A0A140LIT1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc194A0A140LIT1 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc194A0A140LIT1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc194A0A140LIT1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc194A0A140LIT1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc194A0A140LIT1 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc194A0A140LIT1 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc194A0A140LIT1 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc194A0A140LIT1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc194A0A140LIT1 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc194A0A140LIT1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc194A0A140LIT1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.38■□□□□ 0.21
Ccdc194A0A140LIT1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.38■□□□□ 0.21
Ccdc194A0A140LIT1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc194A0A140LIT1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc194A0A140LIT1 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc194A0A140LIT1 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc194A0A140LIT1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc194A0A140LIT1 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc194A0A140LIT1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc194A0A140LIT1 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc194A0A140LIT1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ccdc194A0A140LIT1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc194A0A140LIT1 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.38■□□□□ 0.21
Ccdc194A0A140LIT1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Ccdc194A0A140LIT1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc194A0A140LIT1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ccdc194A0A140LIT1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc194A0A140LIT1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc194A0A140LIT1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc194A0A140LIT1 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc194A0A140LIT1 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Ccdc194A0A140LIT1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc194A0A140LIT1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Ccdc194A0A140LIT1 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc194A0A140LIT1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.37■□□□□ 0.21
Ccdc194A0A140LIT1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc194A0A140LIT1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc194A0A140LIT1 Gm21814-202ENSMUST00000203277 873 ntBASIC16.37■□□□□ 0.21
Ccdc194A0A140LIT1 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc194A0A140LIT1 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Ccdc194A0A140LIT1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc194A0A140LIT1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc194A0A140LIT1 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc194A0A140LIT1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Ccdc194A0A140LIT1 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc194A0A140LIT1 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc194A0A140LIT1 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Ccdc194A0A140LIT1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ccdc194A0A140LIT1 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc194A0A140LIT1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc194A0A140LIT1 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.36■□□□□ 0.21
Ccdc194A0A140LIT1 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc194A0A140LIT1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Ccdc194A0A140LIT1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc194A0A140LIT1 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc194A0A140LIT1 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ccdc194A0A140LIT1 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc194A0A140LIT1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.36■□□□□ 0.21
Ccdc194A0A140LIT1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms