Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Gm26039-201ENSMUST00000158152 144 ntBASIC11.96□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Gm11355-201ENSMUST00000121120 306 ntBASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Gm9013-201ENSMUST00000132939 882 ntBASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Gm28265-201ENSMUST00000188201 2319 ntBASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Gm20628-201ENSMUST00000177363 3215 ntBASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Gm8258-201ENSMUST00000055593 1449 ntBASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Gm5587-201ENSMUST00000206270 674 ntBASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms