Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv1A0A0B4J1G7 Gm11643-201ENSMUST00000119578 864 ntBASIC12.96□□□□□ -0.33
Trbv1A0A0B4J1G7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.96□□□□□ -0.33
Trbv1A0A0B4J1G7 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv1A0A0B4J1G7 Gm20760-201ENSMUST00000179197 648 ntBASIC12.96□□□□□ -0.33
Trbv1A0A0B4J1G7 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.96□□□□□ -0.33
Trbv1A0A0B4J1G7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.96□□□□□ -0.33
Trbv1A0A0B4J1G7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv1A0A0B4J1G7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trbv1A0A0B4J1G7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trbv1A0A0B4J1G7 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv1A0A0B4J1G7 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv1A0A0B4J1G7 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv1A0A0B4J1G7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv1A0A0B4J1G7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv1A0A0B4J1G7 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.96□□□□□ -0.34
Trbv1A0A0B4J1G7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv1A0A0B4J1G7 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Trbv1A0A0B4J1G7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.96□□□□□ -0.34
Trbv1A0A0B4J1G7 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv1A0A0B4J1G7 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Trbv1A0A0B4J1G7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv1A0A0B4J1G7 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv1A0A0B4J1G7 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv1A0A0B4J1G7 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Trbv1A0A0B4J1G7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.95□□□□□ -0.34
Trbv1A0A0B4J1G7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.95□□□□□ -0.34
Trbv1A0A0B4J1G7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv1A0A0B4J1G7 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv1A0A0B4J1G7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trbv1A0A0B4J1G7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv1A0A0B4J1G7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trbv1A0A0B4J1G7 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv1A0A0B4J1G7 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv1A0A0B4J1G7 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv1A0A0B4J1G7 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv1A0A0B4J1G7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv1A0A0B4J1G7 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trbv1A0A0B4J1G7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv1A0A0B4J1G7 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trbv1A0A0B4J1G7 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv1A0A0B4J1G7 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv1A0A0B4J1G7 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.95□□□□□ -0.34
Trbv1A0A0B4J1G7 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv1A0A0B4J1G7 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv1A0A0B4J1G7 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv1A0A0B4J1G7 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 Gm12669-201ENSMUST00000122162 1009 ntBASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms