Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Spcs1-207ENSMUST00000228767 1008 ntBASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Mir5122-201ENSMUST00000175004 89 ntBASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Gm27463-201ENSMUST00000183569 57 ntBASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav21-dv12A0A075B6C4 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Gm37166-201ENSMUST00000195473 2474 ntBASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 AC112142.1-201ENSMUST00000228796 918 ntBASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav21-dv12A0A075B6C4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav21-dv12A0A075B6C4 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav21-dv12A0A075B6C4 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav21-dv12A0A075B6C4 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Trav21-dv12A0A075B6C4 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav21-dv12A0A075B6C4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav21-dv12A0A075B6C4 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav21-dv12A0A075B6C4 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav21-dv12A0A075B6C4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav21-dv12A0A075B6C4 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms