Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-5A0A075B6B5 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-5A0A075B6B5 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-5A0A075B6B5 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav6-5A0A075B6B5 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-5A0A075B6B5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-5A0A075B6B5 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-5A0A075B6B5 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-5A0A075B6B5 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-5A0A075B6B5 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav6-5A0A075B6B5 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Trav6-5A0A075B6B5 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-5A0A075B6B5 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-5A0A075B6B5 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav6-5A0A075B6B5 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav6-5A0A075B6B5 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.79□□□□□ -0.36
Trav6-5A0A075B6B5 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav6-5A0A075B6B5 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-5A0A075B6B5 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-5A0A075B6B5 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav6-5A0A075B6B5 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-5A0A075B6B5 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6-5A0A075B6B5 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6-5A0A075B6B5 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6-5A0A075B6B5 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6-5A0A075B6B5 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6-5A0A075B6B5 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6-5A0A075B6B5 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6-5A0A075B6B5 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.77□□□□□ -0.36
Trav6-5A0A075B6B5 Gm15375-201ENSMUST00000119510 849 ntBASIC12.77□□□□□ -0.37
Trav6-5A0A075B6B5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-5A0A075B6B5 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-5A0A075B6B5 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav6-5A0A075B6B5 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav6-5A0A075B6B5 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC12.77□□□□□ -0.37
Trav6-5A0A075B6B5 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-5A0A075B6B5 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-5A0A075B6B5 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-5A0A075B6B5 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav6-5A0A075B6B5 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav6-5A0A075B6B5 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-5A0A075B6B5 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-5A0A075B6B5 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-5A0A075B6B5 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-5A0A075B6B5 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-5A0A075B6B5 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-5A0A075B6B5 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-5A0A075B6B5 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav6-5A0A075B6B5 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Gm7290-201ENSMUST00000104990 617 ntBASIC12.76□□□□□ -0.37
Trav6-5A0A075B6B5 Gm12918-201ENSMUST00000120234 636 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms