Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-3A0A075B6A4 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-3A0A075B6A4 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-3A0A075B6A4 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-3A0A075B6A4 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-3A0A075B6A4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-3A0A075B6A4 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-3A0A075B6A4 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav12d-3A0A075B6A4 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-3A0A075B6A4 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-3A0A075B6A4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav12d-3A0A075B6A4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-3A0A075B6A4 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-3A0A075B6A4 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-3A0A075B6A4 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-3A0A075B6A4 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-3A0A075B6A4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-3A0A075B6A4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav12d-3A0A075B6A4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-3A0A075B6A4 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-3A0A075B6A4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-3A0A075B6A4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Trav12d-3A0A075B6A4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-3A0A075B6A4 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-3A0A075B6A4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-3A0A075B6A4 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-3A0A075B6A4 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Trav12d-3A0A075B6A4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-3A0A075B6A4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.34□□□□□ -0.43
Trav12d-3A0A075B6A4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav12d-3A0A075B6A4 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav12d-3A0A075B6A4 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.34□□□□□ -0.43
Trav12d-3A0A075B6A4 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav12d-3A0A075B6A4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.34□□□□□ -0.43
Trav12d-3A0A075B6A4 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav12d-3A0A075B6A4 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trav12d-3A0A075B6A4 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav12d-3A0A075B6A4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav12d-3A0A075B6A4 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav12d-3A0A075B6A4 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-3A0A075B6A4 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-3A0A075B6A4 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-3A0A075B6A4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav12d-3A0A075B6A4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-3A0A075B6A4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-3A0A075B6A4 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-3A0A075B6A4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-3A0A075B6A4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-3A0A075B6A4 Mir7075-201ENSMUST00000184187 82 ntBASIC12.33□□□□□ -0.44
Trav12d-3A0A075B6A4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-3A0A075B6A4 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.33□□□□□ -0.44
Trav12d-3A0A075B6A4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC12.33□□□□□ -0.44
Trav12d-3A0A075B6A4 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-3A0A075B6A4 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-3A0A075B6A4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-3A0A075B6A4 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-3A0A075B6A4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav12d-3A0A075B6A4 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav12d-3A0A075B6A4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-3A0A075B6A4 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-3A0A075B6A4 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-3A0A075B6A4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-3A0A075B6A4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-3A0A075B6A4 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-3A0A075B6A4 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-3A0A075B6A4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-3A0A075B6A4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-3A0A075B6A4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-3A0A075B6A4 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav12d-3A0A075B6A4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-3A0A075B6A4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.32□□□□□ -0.44
Trav12d-3A0A075B6A4 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.32□□□□□ -0.44
Trav12d-3A0A075B6A4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Trav12d-3A0A075B6A4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-3A0A075B6A4 Gm40848-201ENSMUST00000221998 324 ntBASIC12.32□□□□□ -0.44
Trav12d-3A0A075B6A4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav12d-3A0A075B6A4 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-3A0A075B6A4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav12d-3A0A075B6A4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-3A0A075B6A4 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-3A0A075B6A4 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-3A0A075B6A4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-3A0A075B6A4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav12d-3A0A075B6A4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Gm10655-201ENSMUST00000098658 1397 ntBASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms