Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav16A0A075B653 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16A0A075B653 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16A0A075B653 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16A0A075B653 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16A0A075B653 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16A0A075B653 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav16A0A075B653 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16A0A075B653 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16A0A075B653 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav16A0A075B653 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav16A0A075B653 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav16A0A075B653 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Trav16A0A075B653 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav16A0A075B653 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.77□□□□□ -0.36
Trav16A0A075B653 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav16A0A075B653 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav16A0A075B653 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav16A0A075B653 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.77□□□□□ -0.36
Trav16A0A075B653 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.77□□□□□ -0.36
Trav16A0A075B653 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav16A0A075B653 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav16A0A075B653 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.77□□□□□ -0.37
Trav16A0A075B653 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav16A0A075B653 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav16A0A075B653 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav16A0A075B653 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav16A0A075B653 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav16A0A075B653 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav16A0A075B653 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav16A0A075B653 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav16A0A075B653 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Trav16A0A075B653 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav16A0A075B653 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav16A0A075B653 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav16A0A075B653 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav16A0A075B653 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav16A0A075B653 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16A0A075B653 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16A0A075B653 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16A0A075B653 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16A0A075B653 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16A0A075B653 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16A0A075B653 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav16A0A075B653 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16A0A075B653 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16A0A075B653 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16A0A075B653 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16A0A075B653 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16A0A075B653 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16A0A075B653 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16A0A075B653 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16A0A075B653 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16A0A075B653 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16A0A075B653 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav16A0A075B653 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Trav16A0A075B653 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16A0A075B653 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav16A0A075B653 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16A0A075B653 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav16A0A075B653 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav16A0A075B653 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16A0A075B653 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16A0A075B653 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Trav16A0A075B653 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16A0A075B653 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16A0A075B653 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16A0A075B653 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav16A0A075B653 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16A0A075B653 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16A0A075B653 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav16A0A075B653 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav16A0A075B653 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16A0A075B653 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16A0A075B653 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16A0A075B653 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16A0A075B653 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16A0A075B653 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16A0A075B653 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav16A0A075B653 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16A0A075B653 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav16A0A075B653 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav16A0A075B653 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16A0A075B653 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.74□□□□□ -0.37
Trav16A0A075B653 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav16A0A075B653 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms