Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.5□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Gm37179-201ENSMUST00000194862 823 ntBASIC13.5□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Gm43183-201ENSMUST00000200632 547 ntBASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.47□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Gm9731-201ENSMUST00000209480 747 ntBASIC13.47□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms